RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SH2D4BQ5SQS7 431 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 PLEKHS1Q5SXH7 462 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ANKS6Q68DC2 871 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 MAVSQ7Z434 540 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 CUZD1Q86UP6 607 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SLC44A3Q8N4M1 653 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 EZH1Q92800 747 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 MSANTD3Q96H12 275 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 EBF4Q9BQW3 602 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 EPHX3Q9H6B9 360 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 KCNK12Q9HB15 430 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ACSS2Q9NR19 701 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ZDHHC2Q9UIJ5 367 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 OARD1Q9Y530 152 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 TNPO3Q9Y5L0 923 aaKnown RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ANTXRLA6NF34 631 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 NUAK1O60285 661 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 FSBPO95073 299 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 RPS17P08708 135 aaKnown RBP12.29□□□□□ -0.44
SHMT2-233ENST00000557529 MPC1LP0DKB6 136 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 EEF1DP29692 281 aaKnown RBP12.29□□□□□ -0.44
SHMT2-233ENST00000557529 CCR7P32248 378 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 DRD3P35462 400 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 GPR1P46091 355 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 MRPS21P82921 87 aaKnown RBP12.29□□□□□ -0.44
SHMT2-233ENST00000557529 GBX1Q14549 363 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 KRT72Q14CN4 511 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 PON2Q15165 354 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 TGFBIQ15582 683 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 SPRED3Q2MJR0 410 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 METTL21CQ5VZV1 264 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 NEK10Q6ZWH5 1172 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 ACAD11Q709F0 780 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 DET1Q7L5Y6 550 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 ALYREFQ86V81 257 aaKnown RBP12.29□□□□□ -0.44
SHMT2-233ENST00000557529 AGR3Q8TD06 166 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 NAT14Q8WUY8 206 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 MOCOSQ96EN8 888 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 PHF7Q9BWX1 381 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-233ENST00000557529 HEBP1Q9NRV9 189 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 LIMD1Q9UGP4 676 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-233ENST00000557529 COQ6Q9Y2Z9 468 aa12.29□□□□□ -0.44
SHMT2-233ENST00000557529 TICRRQ7Z2Z1 1910 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 PLXNB3Q9ULL4 1909 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 ANKRD65E5RJM6 399 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 GRID2O43424 1007 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 ATG13O75143 517 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 MTX2O75431 263 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 DNAJC8O75937 253 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-233ENST00000557529 UNC5CO95185 931 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 EGFP01133 1207 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 C8GP07360 202 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 HOXB2P14652 356 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 VCLP18206 1134 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 RASSF2P50749 326 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 HK3P52790 923 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 RPS14P62263 151 aaKnown RBP12.28□□□□□ -0.44
SHMT2-233ENST00000557529 TMEM115Q12893 351 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-233ENST00000557529 LCP2Q13094 533 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 SP140Q13342 867 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 TUBB3Q13509 450 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 PPP1R3AQ16821 1122 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 FBXO43Q4G163 708 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 C2orf27AQ580R0 203 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 CDKL4Q5MAI5 379 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 AGBL4Q5VU57 503 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 RAET1GQ6H3X3 334 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 METTL2BQ6P1Q9 378 aaKnown RBP12.28□□□□□ -0.44
SHMT2-233ENST00000557529 SBSNQ6UWP8 590 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-233ENST00000557529 CYHR1Q6ZMK1 362 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 HDDC3Q8N4P3 179 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 AADATQ8N5Z0 425 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 IL17RCQ8NAC3 791 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 PDPRQ8NCN5 879 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 ELMO1Q92556 727 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 CCDC28BQ9BUN5 200 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 SHCBP1LQ9BZQ2 653 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 NMUR2Q9GZQ4 415 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 RDH14Q9HBH5 336 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 TCF7L2Q9NQB0 619 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 SCML1Q9UN30 329 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 TRIM33Q9UPN9 1127 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 CDYLQ9Y232 598 aa12.28□□□□□ -0.44
SHMT2-233ENST00000557529 BPTFQ12830 3046 aa12.27□□□□□ -0.44
SHMT2-233ENST00000557529 NCF1BA6NI72 391 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 NCF1CA8MVU1 366 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 SLC16A5O15375 505 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 FFAR2O15552 330 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 SGTAO43765 313 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 RNASEH2AO75792 299 aaKnown RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 TM7SF2O76062 418 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 SIX3O95343 332 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 KLF8O95600 359 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 MLYCDO95822 493 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 SOD1P00441 154 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 DNTTP04053 509 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 FGF4P08620 206 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms