RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 COX4I2Q96KJ9 171 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 CFAP57Q96MR6 1250 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 DPH2Q9BQC3 489 aaPredicted RBP9.15□□□□□ -0.94
NEDD1-211ENST00000557454 SLC7A5P2Q9GIP4 190 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 LHPPQ9H008 270 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 RAB6CQ9H0N0 254 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 RETREG1Q9H6L5 497 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 SYNCQ9H7C4 482 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 FANCEQ9HB96 536 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 CNTN6Q9UQ52 1028 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 ZNF835Q9Y2P0 537 aa9.15□□□□□ -0.94
NEDD1-211ENST00000557454 LUC7L2Q9Y383 392 aaKnown RBP9.15□□□□□ -0.94
NEDD1-211ENST00000557454 HRNRQ86YZ3 2850 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CCDC66A2RUB6 948 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 FAM90A27PA6NNH2 459 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CETN3O15182 167 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CTAG2O75638 210 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 KLHL18O94889 574 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 RASAL1O95294 804 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 SIX3O95343 332 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 ZBTB11O95625 1053 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CPP00450 1065 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 F12P00748 615 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CYP2A6P11509 494 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 BRAFP15056 766 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 AGXTP21549 392 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 TNFSF10P50591 281 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CLCNKAP51800 687 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 PMP22Q01453 160 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 GCNT1Q02742 428 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 SLC9A5Q14940 896 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 DEFB113Q30KQ7 82 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 Q6ZPB1 254 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 BNIPLQ7Z465 357 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CAMKMTQ7Z624 323 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 SPPL2CQ8IUH8 684 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CEP57L1Q8IYX8 460 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 RTL3Q8N8U3 475 aaKnown RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 LINC00301Q8NCQ3 95 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 ANKRD20A12PQ8NF67 263 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 EXD1Q8NHP7 514 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 AGAP11Q8TF27 550 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 PHF10Q8WUB8 498 aaKnown RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CXorf40BQ96DE9 158 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 PAGE5Q96GU1 130 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 THOC3Q96J01 351 aaKnown RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 PPM1MQ96MI6 270 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CD180Q99467 661 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 GPATCH1Q9BRR8 931 aaKnown RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 CLEC4MQ9H2X3 399 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 PLA2G3Q9NZ20 509 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 GPN3Q9UHW5 284 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-211ENST00000557454 PPT2Q9UMR5 302 aa9.14□□□□□ -0.95
NEDD1-211ENST00000557454 FAM170AA1A519 330 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 TTC24A2A3L6 582 aaPredicted RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 ZNHIT1O43257 154 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 F10P00742 488 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 HOXD4P09016 255 aaPredicted RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 CBSLP0DN79 551 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 PYGMP11217 842 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 RPL10P27635 214 aaKnown RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 CBSP35520 551 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 FMO5P49326 533 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 SCNN1BP51168 640 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 DRG2P55039 364 aaKnown RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 ADCY2Q08462 1091 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 FOXD4L6Q3SYB3 417 aaPredicted RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 PARP15Q460N3 678 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 FAM102AQ5T9C2 384 aaPredicted RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 C1orf189Q5VU69 101 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 PAMR1Q6UXH9 720 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 FOXD4L3Q6VB84 417 aaPredicted RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 TRIM72Q6ZMU5 477 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 CHSY3Q70JA7 882 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 RBM12BQ8IXT5 1001 aaKnown RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 CIARTQ8N365 385 aaPredicted RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 TAB3Q8N5C8 712 aaPredicted RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 LMO3Q8TAP4 145 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 TMEM158Q8WZ71 300 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 PTERQ96BW5 349 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 PWWP2AQ96N64 755 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 LMF1Q96S06 567 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 DMRTA2Q96SC8 542 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 C17orf62Q9BQA9 187 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 RIOK2Q9BVS4 552 aaKnown RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 UCK2Q9BZX2 261 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 RMI1Q9H9A7 625 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 GPATCH2LQ9NWQ4 482 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 COQ3Q9NZJ6 369 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 SLC23A2Q9UGH3 650 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 CNOT6Q9ULM6 557 aaKnown RBP9.13□□□□□ -0.95
NEDD1-211ENST00000557454 CDYLQ9Y232 598 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 DNAJC16Q9Y2G8 782 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 GTF3C1Q12789 2109 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 MEGF8Q7Z7M0 2845 aa9.13□□□□□ -0.95
NEDD1-211ENST00000557454 C17orf113A0A1B0GUU1 675 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 FAM237BA0A1B0GVD1 139 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 DYTNA2CJ06 578 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 WASH4PA8MWX3 477 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 H7C1Q1 480 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms