RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 ZNF7P17097 686 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 BPIP17213 487 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 AMD1P17707 334 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 IDSP22304 550 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 MPSTP25325 297 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 CD68P34810 354 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 HALP42357 657 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 CLCNKAP51800 687 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 GEMP55040 296 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 WASHC5Q12768 1159 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 TMEM115Q12893 351 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 XRCC4Q13426 336 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 ITGA9Q13797 1035 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 TGIF1Q15583 401 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 PPP2R5EQ16537 467 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 TAZQ16635 292 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 FAM182AQ5T1J6 154 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 ZNF648Q5T619 568 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 KIAA1614Q5VZ46 1190 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 WDR74Q6RFH5 385 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 CRTC3Q6UUV7 619 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 CAPN12Q6ZSI9 719 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 BBS12Q6ZW61 710 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 ADGRG6Q86SQ4 1221 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 ZNF605Q86T29 641 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 PLXDC1Q8IUK5 500 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 CDKL3Q8IVW4 592 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 ZNF567Q8N184 647 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 TXLNBQ8N3L3 684 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 IL22RA1Q8N6P7 574 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 IPMKQ8NFU5 416 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 BLOC1S5Q8TDH9 187 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 ART4Q93070 314 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 GTPBP3Q969Y2 492 aaKnown RBP7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 EID2BQ96D98 161 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 SGF29Q96ES7 293 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 QKIQ96PU8 341 aaKnown RBP eCLIP7.58□□□□□ -1.21e-7■■□□□ 11.5
HNRNPC-226ENST00000556628 VPS35Q96QK1 796 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 PANX2Q96RD6 677 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 TIMM29Q9BSF4 260 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 HEMGNQ9BXL5 484 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 KCNF1Q9H3M0 494 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 GOLPH3Q9H4A6 298 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 RRAGDQ9NQL2 400 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 SLC39A1Q9NY26 324 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 FOXJ2Q9P0K8 574 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 CPNE7Q9UBL6 633 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 PKP3Q9Y446 797 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 PCDHGA3Q9Y5H0 932 aa7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 DSPP15924 2871 aaKnown RBP7.58□□□□□ -1.2
HNRNPC-226ENST00000556628 FREM2Q5SZK8 3169 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 GLYATL1P3A0A0U1RQE8 302 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 GOLGA6L9A6NEM1 432 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 C2orf81A6NN90 581 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 B4E171 279 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 CHUKO15111 745 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 STX7O15400 261 aaKnown RBP7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 EFSO43281 561 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 PPFIA2O75334 1257 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 MTX2O75431 263 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 FGF3P11487 239 aaPredicted RBP7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 XRCC1P18887 633 aaPredicted RBP7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 RBL1P28749 1068 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 CSF2RBP32927 897 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 CTNNA1P35221 906 aaKnown RBP7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 HMGCLP35914 325 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 TSPAN7P41732 249 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 MARCKSL1P49006 195 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 RWDD2BP57060 319 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 OTUD4Q01804 1114 aaKnown RBP7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 ADCY2Q08462 1091 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 LY6DQ14210 128 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 NOMO1Q15155 1222 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 SLC1A5Q15758 541 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 SEPT7Q16181 437 aaKnown RBP7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 ATP13A5Q4VNC0 1218 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 SIRPB2Q5JXA9 342 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 LDLRAP1Q5SW96 308 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 DARS2Q6PI48 645 aaKnown RBP7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 KDELC1Q6UW63 502 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 XKR5Q6UX68 686 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 CEACAM20Q6UY09 585 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 KIAA1328Q86T90 577 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 TRAPPC5Q8IUR0 188 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 RBM12BQ8IXT5 1001 aaKnown RBP7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 ZNF295-AS1Q8N0V1 137 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 GALNT6Q8NCL4 622 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 TTC9Q92623 222 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 CXorf40BQ96DE9 158 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 PPP1R2P1Q96PQ5 205 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 ZPBPQ9BS86 351 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 DDA1Q9BW61 102 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 GRIP2Q9C0E4 1043 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 UCK1Q9HA47 277 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 PRDM8Q9NQV8 689 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 POT1Q9NUX5 634 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 TMEM9Q9P0T7 183 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 KLHL3Q9UH77 587 aa7.57□□□□□ -1.2
HNRNPC-226ENST00000556628 TFR2Q9UP52 801 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms