RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 TERF1P54274 439 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 MFAP4P55083 255 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 MLLT10P55197 1068 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 CD81P60033 236 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 PHEXP78562 749 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 MRPS5P82675 430 aaKnown RBP4.32□□□□□ -1.72
SCFD1-221ENST00000556534 KCNC3Q14003 757 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 KIR2DS5Q14953 304 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 DLG2Q15700 870 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 PLEKHS1Q5SXH7 462 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 ZDHHC20Q5W0Z9 365 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 ITPRIPL1Q6GPH6 555 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 RPAP2Q8IXW5 612 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-221ENST00000556534 KLHDC9Q8NEP7 349 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 SMPDL3BQ92485 455 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 LRRC59Q96AG4 307 aaKnown RBP4.32□□□□□ -1.72
SCFD1-221ENST00000556534 ABHD8Q96I13 439 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 CEP295NLQ96MC4 621 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 EPYCQ99645 322 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 HRH4Q9H3N8 390 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 TXLNGQ9NUQ3 528 aa4.32□□□□□ -1.72
SCFD1-221ENST00000556534 SEC63Q9UGP8 760 aaKnown RBP4.32□□□□□ -1.72
SCFD1-221ENST00000556534 ZNF215Q9UL58 517 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-221ENST00000556534 GREB1LQ9C091 1923 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-221ENST00000556534 ANKRD18BA2A2Z9 1011 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 ERVV-2B6SEH9 535 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 LINC01565O15544 149 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 PRKNO60260 465 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-221ENST00000556534 GCNT3O95395 438 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 PAX1P15863 534 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 ANOS1P23352 680 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 DCTP40126 519 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 PPP2R2BQ00005 443 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 MBTD1Q05BQ5 628 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 HYAL1Q12794 435 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 GAGE2BQ13066 116 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 GAGE2EQ4V326 116 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 ZNF628Q5EBL2 1059 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 CCNYL2Q5T2Q4 361 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 FAM109BQ6ICB4 259 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-221ENST00000556534 GAGE2AQ6NT46 116 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 PACS1Q6VY07 963 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 SLC26A9Q7LBE3 791 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 TRMT1LQ7Z2T5 733 aaKnown RBP4.31□□□□□ -1.72
SCFD1-221ENST00000556534 LONP2Q86WA8 852 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 TMTC2Q8N394 836 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 LRRC8CQ8TDW0 803 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 ST6GAL2Q96JF0 529 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 C17orf77Q96MU5 243 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 PGLYRP2Q96PD5 576 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 SDF4Q9BRK5 362 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 MAK16Q9BXY0 300 aaKnown RBP4.31□□□□□ -1.72
SCFD1-221ENST00000556534 SEMA6AQ9H2E6 1030 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 MBNL1Q9NR56 388 aaKnown RBP4.31□□□□□ -1.72
SCFD1-221ENST00000556534 GAGE2DQ9UEU5 116 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 ADD3Q9UEY8 706 aaKnown RBP4.31□□□□□ -1.72
SCFD1-221ENST00000556534 GPR34Q9UPC5 381 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 YIPF1Q9Y548 306 aa4.31□□□□□ -1.72
SCFD1-221ENST00000556534 A0A1W2PPI3 338 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 A0A1W2PQ09 198 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 B4DLN1 442 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 BMP10O95393 424 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 TFAP2AP05549 437 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 LIPFP07098 398 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 CSH1P0DML2 217 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 CSH2P0DML3 217 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 NMBRP28336 390 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 MRPL12P52815 198 aaKnown RBP4.3□□□□□ -1.72
SCFD1-221ENST00000556534 LINC01547P58512 204 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-221ENST00000556534 CXCL9Q07325 125 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 KIR2DS3Q14952 304 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 FASTKD5Q7L8L6 764 aaKnown RBP4.3□□□□□ -1.72
SCFD1-221ENST00000556534 GALNT5Q7Z7M9 940 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 AACSQ86V21 672 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 SAT2Q96F10 170 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-221ENST00000556534 TFB2MQ9H5Q4 396 aaKnown RBP4.3□□□□□ -1.72
SCFD1-221ENST00000556534 SLA2Q9H6Q3 261 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-221ENST00000556534 PCDHGA5Q9Y5G8 931 aa4.3□□□□□ -1.72
SCFD1-221ENST00000556534 TEX13DA0A0J9YY54 714 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-221ENST00000556534 OR2A25A4D2G3 310 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 PRR23AA6NEV1 266 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 LRRC72A6NJI9 287 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 NDUFS4O43181 175 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 RSL1D1O76021 490 aaKnown RBP4.29□□□□□ -1.72
SCFD1-221ENST00000556534 KRT19P08727 400 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 ALOX12P18054 663 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 GLIPR1P48060 266 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 CLNS1AP54105 237 aaKnown RBP4.29□□□□□ -1.72
SCFD1-221ENST00000556534 PNLIPRP2P54317 469 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 LMOD3Q0VAK6 560 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 GFI1BQ5VTD9 330 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 SPATA1Q5VX52 437 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 ANO5Q75V66 913 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 PTOV1Q86YD1 416 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 C1orf131Q8NDD1 294 aaKnown RBP4.29□□□□□ -1.72
SCFD1-221ENST00000556534 RDM1Q8NG50 284 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 NR4A3Q92570 626 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 ZNF354BQ96LW1 612 aa4.29□□□□□ -1.72
SCFD1-221ENST00000556534 ZNF582Q96NG8 517 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms