RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 CLCN3P51790 818 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 ARFIP1P53367 373 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 SH3BGRP55822 239 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 HDAC4P56524 1084 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 NLRP11P59045 1033 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 NOP14P78316 857 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 PTP4A2Q12974 167 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CUL2Q13617 745 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 OASLQ15646 514 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 SLC44A4Q53GD3 710 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 HSP90B2PQ58FF3 399 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 RAP1GAP2Q684P5 730 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 C8orf74Q6P047 294 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 TRAT1Q6PIZ9 186 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 MTHFD1LQ6UB35 978 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CRELD2Q6UXH1 353 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 TMPRSS9Q7Z410 1059 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CLNKQ7Z7G1 428 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 TMEM110Q86TL2 294 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 ADGRG3Q86Y34 549 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 RASAL3Q86YV0 1011 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 WDTC1Q8N5D0 677 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 LINC01465Q8N7H1 131 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 LRRC57Q8N9N7 239 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 EIF1ADQ8N9N8 165 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 FAM98AQ8NCA5 519 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 SPATA4Q8NEY3 305 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 OR56A3Q8NH54 315 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CCDC26Q8TAB7 109 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 NCSTNQ92542 709 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 SEMA4DQ92854 862 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 FAM162AQ96A26 154 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 TMEM125Q96AQ2 219 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 ZBTB45Q96K62 511 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 CNDP1Q96KN2 507 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CAPZA3Q96KX2 299 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 NLRP4Q96MN2 994 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 BBC3Q96PG8 261 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 GBP5Q96PP8 586 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 MMS19Q96T76 1030 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 C16orf70Q9BSU1 422 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 SPXQ9BT56 116 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 KRTAP17-1Q9BYP8 105 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 GCOM2Q9BZD3 368 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 MIS12Q9H081 205 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 BRD8Q9H0E9 1235 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 SLC25A18Q9H1K4 315 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CARD9Q9H257 536 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 R3HDMLQ9H3Y0 253 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 IL21RQ9HBE5 538 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 MRPL47Q9HD33 250 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 PDGFCQ9NRA1 345 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 PAPOLBQ9NRJ5 636 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 SNTG1Q9NSN8 517 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 SIDT1Q9NXL6 827 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 AKAP7Q9P0M2 348 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 HDAC6Q9UBN7 1215 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 EXTL2Q9UBQ6 330 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 NOCTQ9UK39 431 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 CORO1CQ9ULV4 474 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 CA14Q9ULX7 337 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CNTN6Q9UQ52 1028 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.18□□□□□ -1.58
SRP54-211ENST00000556445 AP1M2Q9Y6Q5 423 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 RGSL1A5PLK6 1076 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 A8MV72 311 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 MGST3O14880 152 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 KLK10O43240 276 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 HNRNPRO43390 633 aaKnown RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 CCNDBP1O95273 360 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 VNN1O95497 513 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 LSM8O95777 96 aaKnown RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 FTCDO95954 541 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 TFRCP02786 760 aaKnown RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 CALB1P05937 261 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 HEXBP07686 556 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 PAEPP09466 180 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 RHOXF2BP0C7M4 288 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 PECAM1P16284 738 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 ANXA11P50995 505 aaKnown RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 ALDH18A1P54886 795 aaKnown RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 POU6F2P78424 691 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 SIM1P81133 766 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 HTD2P86397 168 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 MC2RQ01718 297 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 MBTD1Q05BQ5 628 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 ZNF844Q08AG5 666 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 CTBP1Q13363 440 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 RAB32Q13637 225 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 ZKSCAN8Q15776 578 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 SLC5A9Q2M3M2 681 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 ALG11Q2TAA5 492 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 ZNF699Q32M78 642 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 TRIM60Q495X7 471 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 ZNF667Q5HYK9 610 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 SEL1L2Q5TEA6 688 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 FAXCQ5TGI0 409 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 MFSD14CQ5VZR4 134 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 CST9Q5W186 159 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms