RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 LRRC4CQ9HCJ2 640 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 SERINC1Q9NRX5 453 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 SLC27A5Q9Y2P5 690 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 HES2Q9Y543 173 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 FAM92AA1XBS5 289 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 PRAMEF1O95521 474 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 UGT2B4P06133 528 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 CDH3P22223 829 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 PTDSS1P48651 473 aaKnown RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 ZMYND11Q15326 602 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 CYP1B1Q16678 543 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 LRRC70Q7Z2Q7 622 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 GPR156Q8NFN8 814 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 IL31RAQ8NI17 732 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 UBASH3BQ8TF42 649 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TWIST2Q8WVJ9 160 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 FAR1Q8WVX9 515 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 CPXM1Q96SM3 734 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 NDNQ99608 321 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TCF25Q9BQ70 676 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 GPATCH1Q9BRR8 931 aaKnown RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 COMMD4Q9H0A8 199 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 CHKBQ9Y259 395 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 SPIN1Q9Y657 262 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 LOC100506127A0A0U1RQW1 187 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 METTL21EPA6NDL7 271 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 AQP12BA6NM10 295 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 DDX3YO15523 660 aaKnown RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 EPHX1P07099 455 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 PRPS1L1P21108 318 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 GRK6P43250 576 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 SUOXP51687 545 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 SLC25A3Q00325 362 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 C2orf80Q0P641 193 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TIGD2Q4W5G0 525 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 IFI44LQ53G44 452 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 PDSS1Q5T2R2 415 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TCEAL6Q6IPX3 200 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 MSANTD2Q6P1R3 559 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 ZNF783Q6ZMS7 281 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 QSOX2Q6ZRP7 698 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 DET1Q7L5Y6 550 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TMPRSS11BQ86T26 416 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 AQP12AQ8IXF9 295 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 PYDC1Q8WXC3 89 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 MTFMTQ96DP5 389 aaKnown RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 SCGB3A2Q96PL1 93 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 DGCR6LQ9BY27 220 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TMEM138Q9NPI0 162 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 SDHAF3Q9NRP4 125 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 SMPD3Q9NY59 655 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 FADS3Q9Y5Q0 445 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 AP4B1Q9Y6B7 739 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 B4GALT5O43286 388 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 KHDRBS3O75525 346 aaKnown RBP10.6□□□□□ -0.71
ACTN1-216ENST00000556083 NPPAP01160 153 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 RB1P06400 928 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 PITPNAQ00169 270 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 ROR2Q01974 943 aaKnown RBP10.6□□□□□ -0.71
ACTN1-216ENST00000556083 KCNC3Q14003 757 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 DEF8Q6ZN54 512 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 ZNF527Q8NB42 609 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 C8orf48Q96LL4 319 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 CRTAC1Q9NQ79 661 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 INSL6Q9Y581 213 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 IGKV6D-41A0A0C4DH26 115 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 TTLL8A6PVC2 850 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 SSNA1O43805 119 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 COQ9O75208 318 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 TRMUO75648 421 aaKnown RBP10.6□□□□□ -0.71
ACTN1-216ENST00000556083 RSL1D1O76021 490 aaKnown RBP10.6□□□□□ -0.71
ACTN1-216ENST00000556083 TFPIP10646 304 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 THRBP10828 461 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 MASP1P48740 699 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 EIF2B2P49770 351 aaKnown RBP10.6□□□□□ -0.71
ACTN1-216ENST00000556083 CRISP3P54108 245 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 EEFSECP57772 596 aaKnown RBP10.6□□□□□ -0.71
ACTN1-216ENST00000556083 PPP3R1P63098 170 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 SP140Q13342 867 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 LRRC32Q14392 662 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 LPIN1Q14693 890 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 KCNA10Q16322 511 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 PLET1Q6UQ28 207 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 ATG14Q6ZNE5 492 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 UXS1Q8NBZ7 420 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 KCTD15Q96SI1 283 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-216ENST00000556083 EPYCQ99645 322 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 SPATA9Q9BWV2 254 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 SLC2A4RGQ9NR83 387 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 DZANK1Q9NVP4 752 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 MKS1Q9NXB0 559 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 LINC00854A0A1B0GVQ3 168 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 FAM234BA2RU67 622 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 TNFRSF11BO00300 401 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 PRODHO43272 600 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 CCNE2O96020 404 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 IGFBP5P24593 272 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 NRG3P56975 720 aa10.6□□□□□ -0.71
ACTN1-216ENST00000556083 GTF2H2Q13888 395 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms