RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TECRLQ5HYJ1 363 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 DOK6Q6PKX4 331 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 NAPRTQ6XQN6 538 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 OTOAQ7RTW8 1153 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 ADGRG6Q86SQ4 1221 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 HEATR4Q86WZ0 1026 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 SPEM1Q8N4L4 309 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 RASGEF1AQ8N9B8 481 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 GIMAP7Q8NHV1 300 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 RDH11Q8TC12 318 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 EEF1AKMT1Q8WVE0 214 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 SREK1Q8WXA9 508 aaKnown RBP9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 ASB12Q8WXK4 309 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 ZNF75CPQ92670 426 aaPredicted RBP9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 GPR78Q96P69 363 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 MRPL57Q9BQC6 102 aaKnown RBP9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 MECRQ9BV79 373 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 TPSD1Q9BZJ3 242 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 DERL2Q9GZP9 239 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 MRPL46Q9H2W6 279 aaKnown RBP9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 CHRDQ9H2X0 955 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 RABEP2Q9H5N1 569 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 CCDC134Q9H6E4 229 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 ALG9Q9H6U8 611 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 CD320Q9NPF0 282 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 FZD3Q9NPG1 666 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 PHPT1Q9NRX4 125 aaPredicted RBP9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 PSD3Q9NYI0 1048 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 USP36Q9P275 1121 aaKnown RBP9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 COPG2Q9UBF2 871 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 XPR1Q9UBH6 696 aa9.52□□□□□ -0.89
HNRNPC-220ENST00000555585 GMNCA6NCL1 334 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 NPEPPSL1A6NEC2 478 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 BTN3A1O00481 513 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 KPNA5O15131 536 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 RAD51BO15315 384 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 HRO43593 1189 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 VEGFDO43915 354 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 ZNF217O75362 1048 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 DCNP07585 359 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 TEAD1P28347 426 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 CCR7P32248 378 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 IGFALSP35858 605 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 RPS9P46781 194 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 CTSCP53634 463 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 SEC24CP53992 1094 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 CDK3Q00526 305 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 BOP1Q14137 746 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 PCLAFQ15004 111 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 CHI3L2Q15782 390 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 SYTL3Q4VX76 610 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 ACSBG2Q5FVE4 666 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 ATG16L1Q676U5 607 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 ZYG11AQ6WRX3 759 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 TRIM69Q86WT6 500 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 C10orf107Q8IVU9 208 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 LRRC34Q8IZ02 419 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 MYO1HQ8N1T3 1032 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 BEND7Q8N7W2 519 aaPredicted RBP9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 ELMO1Q92556 727 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 EXT2Q93063 718 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 CLDN23Q96B33 292 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 CHMP6Q96FZ7 201 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 TOE1Q96GM8 510 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 COX14Q96I36 57 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 NECAB3Q96P71 396 aaPredicted RBP9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 CCM2Q9BSQ5 444 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 FAM107BQ9H098 131 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 EPN3Q9H201 632 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 TFB2MQ9H5Q4 396 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 WDR26Q9H7D7 661 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 MANSC1Q9H8J5 431 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 LATS2Q9NRM7 1088 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 ATXN10Q9UBB4 475 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 FAM8A1Q9UBU6 413 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 MBD1Q9UIS9 605 aaPredicted RBP9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 RNF112Q9ULX5 631 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 TMEM98Q9Y2Y6 226 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 DOCK9Q9BZ29 2069 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 PIKFYVEQ9Y2I7 2098 aa9.51□□□□□ -0.89
HNRNPC-220ENST00000555585 G3V2L1 256 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 CDC7O00311 574 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 FPGTO14772 594 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 SGTAO43765 313 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 SMIM24O75264 130 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 NDUFS2O75306 463 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 FSBPO95073 299 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 IGLV3-19P01714 112 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 SBK3P0C264 359 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 CBSLP0DN79 551 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 ZNF8P17098 575 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 HNRNPA2B1P22626 353 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 ATP5F1P24539 256 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 AOAHP28039 575 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 CD6P30203 668 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 AKT2P31751 481 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 CBSP35520 551 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 CXCL12P48061 93 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 PXNP49023 591 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 PRLHRP49683 370 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms