RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 NANOGNBQ7Z5D8 188 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ARMC8Q8IUR7 673 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 MMAAQ8IVH4 418 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF683Q8IZ20 524 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 CLEC4FQ8N1N0 589 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 SPATA6LQ8N4H0 392 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 TMEM199Q8N511 208 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 OR52E4Q8NGH9 312 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 RHEBL1Q8TAI7 183 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PEX13Q92968 403 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 NODALQ96S42 347 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 RBM4BQ9BQ04 359 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 RBM4Q9BWF3 364 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 BRINP2Q9C0B6 783 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 MFSD1Q9H3U5 465 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 SP110Q9HB58 689 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 NTN4Q9HB63 628 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 NDFIP2Q9NV92 336 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 FAM118AQ9NWS6 357 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PAK1IP1Q9NWT1 392 aaPredicted RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ZIM2Q9NZV7 527 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 MPP6Q9NZW5 540 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC27A5Q9Y2P5 690 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PTPRDP23468 1912 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 IGLV3-10A0A075B6K4 115 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ATP6AP2A0A1C7CYW4 349 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ATP6AP2O75787 350 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 CDK14O94921 469 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ASGR1P07306 291 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 POLR2EP19388 210 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 NFKBIAP25963 317 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 TPD52P55327 224 aaPredicted RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 FCGRTP55899 365 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PHC1P78364 1004 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 CHRNB3Q05901 458 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 CD300CQ08708 224 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 KRR1Q13601 381 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 POLD3Q15054 466 aaPredicted RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ZC3H12BQ5HYM0 836 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PERM1Q5SV97 790 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 HECTD2Q5U5R9 776 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PIK3R6Q5UE93 754 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 TBPL2Q6SJ96 375 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ISCA2Q86U28 154 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ITIH5Q86UX2 942 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ZDHHC13Q8IUH4 622 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 DPP10Q8N608 796 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 FBLIM1Q8WUP2 373 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 TMBIM1Q969X1 311 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 TADA1Q96BN2 335 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PHF21BQ96EK2 531 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 RNF145Q96MT1 663 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 CCDC115Q96NT0 180 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 UGT2B28Q9BY64 529 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 EHD1Q9H4M9 534 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 NOL6Q9H6R4 1146 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 EPS8L2Q9H6S3 715 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 GPBP1L1Q9HC44 474 aaPredicted RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 NT5MQ9NPB1 228 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 SCUBE2Q9NQ36 999 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 RGS18Q9NS28 235 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 AIG1Q9NVV5 245 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 COMMD8Q9NX08 183 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 IL37Q9NZH6 218 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 DNAJB9Q9UBS3 223 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 C3orf18Q9UK00 162 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PCDHB5Q9Y5E4 795 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ST14Q9Y5Y6 855 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 NYNRINQ9P2P1 1898 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 DOCK3Q8IZD9 2030 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 TDRD15B5MCY1 1934 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 MROH6A6NGR9 719 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 TAF4O00268 1085 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 PIP5K1BO14986 540 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 SYN3O14994 580 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ITGB1P05556 798 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 GSNP06396 782 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 HTR1AP08908 422 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ARSAP15289 507 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 HRH2P25021 359 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ACVR2AP27037 513 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 CST5P28325 142 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 CHRNA4P43681 627 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 PGGT1BP53609 377 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 MAPK10P53779 464 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 SH3BP2P78314 561 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 MVKQ03426 396 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 IL10RBQ08334 325 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ITKQ08881 620 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 TRIP4Q15650 581 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 PCSK7Q16549 785 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF181Q2M3W8 571 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 INAVAQ3KP66 663 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 PARP15Q460N3 678 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 MS4A13Q5J8X5 152 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 RBM20Q5T481 1227 aaKnown RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 UGT3A1Q6NUS8 523 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 AKAP14Q86UN6 197 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 HID1Q8IV36 788 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms