RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SATL1Q86VE3 508 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 OR2AP1Q8NGE2 309 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 TPD52L3Q96J77 140 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 PSKH2Q96QS6 385 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 KCTD14Q9BQ13 255 aaPredicted RBP12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 OR2AG1Q9H205 316 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 RHBGQ9H310 441 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 SUV39H2Q9H5I1 410 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 SIRPGQ9P1W8 387 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 EMCNQ9ULC0 261 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 CLCA2Q9UQC9 943 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 SLCO1B7G3V0H7 640 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 MMP20O60882 483 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 PRDX3P30048 256 aaKnown RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 SFSWAPQ12872 951 aaKnown RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 SGCGQ13326 291 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 MTX3Q5HYI7 312 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 PPP2R2DQ66LE6 453 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 PRR23CQ6ZRP0 262 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 GAREM2Q75VX8 874 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 CENPLQ8N0S6 344 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 OR14C36Q8NHC7 312 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 TOP1MTQ969P6 601 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 PLD4Q96BZ4 506 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 CIB1Q99828 191 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 NOL6Q9H6R4 1146 aaKnown RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 PPM1HQ9ULR3 514 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 TMEM98Q9Y2Y6 226 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 GRM6O15303 877 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 EIF2S1P05198 315 aaKnown RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 ANPEPP15144 967 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 XRCC1P18887 633 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 ADARP55265 1226 aaKnown RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 MEF2AQ02078 507 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 FRG1Q14331 258 aaKnown RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 TPGS2Q68CL5 300 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 SDE2Q6IQ49 451 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 TMEM220Q6QAJ8 160 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 KBTBD2Q8IY47 623 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 OR52B6Q8NGF0 335 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 SHKBP1Q8TBC3 707 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 VTI1BQ9UEU0 232 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 GNPTGQ9UJJ9 305 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 NDRG2Q9UN36 371 aaKnown RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 GPSM3Q9Y4H4 160 aa12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 COPG1Q9Y678 874 aaKnown RBP12.08□□□□□ -0.48
ARHGEF40-206ENST00000555232 LEFTY1O75610 366 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 S1PR4O95977 384 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 SPAM1P38567 509 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 THOP1P52888 689 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 DLG1Q12959 904 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 NUDT18Q6ZVK8 323 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 TMPRSS11BQ86T26 416 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 DHFR2Q86XF0 187 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 MDGA1Q8NFP4 955 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 FOXJ1Q92949 421 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 COL26A1Q96A83 441 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 RTP4Q96DX8 246 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 TSGA13Q96PP4 275 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 KLHL25Q9H0H3 589 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 AKTIPQ9H8T0 292 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 PRDM16Q9HAZ2 1276 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 PRKAG3Q9UGI9 489 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 ZNF490Q9ULM2 529 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 MTHFD1P11586 935 aaKnown RBP12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 PEX2P28328 305 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 MTPNP58546 118 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 KCTD21Q4G0X4 260 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 SUSD1Q6UWL2 747 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 SLC22A15Q8IZD6 547 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 NUDT8Q8WV74 236 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 NT5C3BQ969T7 300 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 TMEM74Q96NL1 305 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 KXD1Q9BQD3 176 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 PLAGL1Q9UM63 463 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 ATAD5Q96QE3 1844 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 KRT6AP02538 564 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 KRT6BP04259 564 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 CD72P21854 359 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 POU1F1P28069 291 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 KRT6CP48668 564 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 STC1P52823 247 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 FOXA1P55317 472 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 ACSM2AQ08AH3 577 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 TCTN1Q2MV58 587 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 TMEM31Q5JXX7 168 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 ACSM2BQ68CK6 577 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 STK32CQ86UX6 486 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 RAVER1Q8IY67 606 aaKnown RBP12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 ENDOVQ8N8Q3 282 aaKnown RBP12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 PANX3Q96QZ0 392 aa12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 FAF1Q9UNN5 650 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF40-206ENST00000555232 KDELR3O43731 214 aa12.06□□□□□ -0.48
ARHGEF40-206ENST00000555232 NRP2O60462 931 aa12.06□□□□□ -0.48
ARHGEF40-206ENST00000555232 RNASEH1O60930 286 aaKnown RBP12.06□□□□□ -0.48
ARHGEF40-206ENST00000555232 H2AFYO75367 372 aaKnown RBP12.06□□□□□ -0.48
ARHGEF40-206ENST00000555232 T-ENOLP0DO92 83 aa12.06□□□□□ -0.48
ARHGEF40-206ENST00000555232 BMP1P13497 986 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms