RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CCR10P46092 362 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 MLLT6P55198 1093 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CASP6P55212 293 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ERVK-24P63145 666 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CD47Q08722 323 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 SMARCB1Q12824 385 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 FSTL1Q12841 308 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TNFAIP8L3Q5GJ75 292 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 UBXN11Q5T124 520 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM161BQ8NDZ6 487 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 KLHL15Q96M94 604 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 NPAS2Q99743 824 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TREM1Q9NP99 234 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CENPMQ9NSP4 180 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CLDN5O00501 218 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CHRM5P08912 532 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CD247P20963 164 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 OR1D2P34982 312 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF268Q14587 947 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 LINGO4Q6UY18 593 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CAND1Q86VP6 1230 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TCEANCQ8N8B7 351 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 OR4L1Q8NH43 312 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 C14orf166Q9Y224 244 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 FAM227AF5H4B4 570 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 H0YGN5 161 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PPEF2O14830 753 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 GZMAP12544 262 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 IGFBP5P24593 272 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 C3orf33Q6P1S2 294 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 GK5Q6ZS86 529 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZCCHC9Q8N567 271 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZBTB2Q8N680 514 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 YIPF7Q8N8F6 280 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 SPAG4Q9NPE6 437 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 RPP14O95059 124 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ADRA1DP25100 572 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 KHKP50053 298 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 RAB10P61026 200 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PRR5P85299 388 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ILF2Q12905 390 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TIGD2Q4W5G0 525 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ATAT1Q5SQI0 421 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZYG11AQ6WRX3 759 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 IQCHQ86VS3 1027 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZDHHC17Q8IUH5 632 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 HDAC10Q969S8 669 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 S100PBPQ96BU1 408 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZFP3Q96NJ6 502 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 RTKNQ9BST9 563 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PNPLA3Q9NST1 481 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 WASF3Q9UPY6 502 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 MAGI2Q86UL8 1455 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 JCADQ9P266 1359 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 OR2AG2A6NM03 316 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 HCKP08631 526 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 SREBF1P36956 1147 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PSTKQ8IV42 348 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM192Q8IY95 271 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 OR4K17Q8NGC6 315 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ABHD16BQ9H3Z7 469 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 HIPK3Q9H422 1215 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 FN3KQ9H479 309 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CARD8Q9Y2G2 431 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PER2O15055 1255 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PAPSS1O43252 624 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 LYPLA1O75608 230 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 VARSP26640 1264 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CD40LGP29965 261 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ACSL1P33121 698 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 GRK6P43250 576 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CDH12P55289 794 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CTBP1Q13363 440 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 SHQ1Q6PI26 577 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 UNC5AQ6ZN44 842 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 FAM110BQ8TC76 370 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZSWIM3Q96MP5 696 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 UROC1Q96N76 676 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TSSK3Q96PN8 268 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 KIAA1683Q9H0B3 1180 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 FANCFQ9NPI8 374 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 NINJ2Q9NZG7 142 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ASTN2O75129 1339 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PITPNM1O00562 1244 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 MPPED1O15442 326 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 MT-CYBP00156 380 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 MT-ND1P03886 318 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ARPC4P59998 168 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 XIAPP98170 497 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PARP6Q2NL67 630 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PPP2R2DQ66LE6 453 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 VITQ6UXI7 678 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 C1orf186Q6ZWK4 172 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 VASH1Q7L8A9 365 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ANKRD46Q86W74 232 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 BEND7Q8N7W2 519 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TRPV4Q9HBA0 871 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TRIM36Q9NQ86 728 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM150CB9EJG8 249 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 NPIPA5E9PKD4 350 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms