RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 NLRP8Q86W28 1048 aa8.78□□□□□ -1
TDP1-210ENST00000554976 NRSN1Q8IZ57 195 aa8.78□□□□□ -1
TDP1-210ENST00000554976 CPA6Q8N4T0 437 aa8.78□□□□□ -1
TDP1-210ENST00000554976 CCNYL1Q8N7R7 359 aa8.78□□□□□ -1
TDP1-210ENST00000554976 AGR3Q8TD06 166 aa8.78□□□□□ -1
TDP1-210ENST00000554976 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.78□□□□□ -1
TDP1-210ENST00000554976 PBXIP1Q96AQ6 731 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ASB2Q96Q27 587 aa8.78□□□□□ -1
TDP1-210ENST00000554976 CLPBQ9H078 707 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ABCG8Q9H221 673 aa8.78□□□□□ -1
TDP1-210ENST00000554976 CCDC68Q9H2F9 335 aa8.78□□□□□ -1
TDP1-210ENST00000554976 RDH14Q9HBH5 336 aa8.78□□□□□ -1
TDP1-210ENST00000554976 EML4Q9HC35 981 aaKnown RBP8.78□□□□□ -1
TDP1-210ENST00000554976 THG1LQ9NWX6 298 aaKnown RBP8.78□□□□□ -1
TDP1-210ENST00000554976 DEC1Q9P2X7 70 aa8.78□□□□□ -1
TDP1-210ENST00000554976 EPS15L1Q9UBC2 864 aa8.78□□□□□ -1
TDP1-210ENST00000554976 CD84Q9UIB8 345 aa8.78□□□□□ -1
TDP1-210ENST00000554976 RNF112Q9ULX5 631 aa8.78□□□□□ -1
TDP1-210ENST00000554976 ITM2BQ9Y287 266 aa8.78□□□□□ -1
TDP1-210ENST00000554976 LRP4O75096 1905 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 PLXND1Q9Y4D7 1925 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 BNIP3LO60238 219 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 DIAPH2O60879 1101 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 LILRB5O75023 590 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 WFS1O76024 890 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 HLA-EP13747 358 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 XKR7Q5GH72 579 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 TRIM74Q86UV6 250 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 TRIM73Q86UV7 250 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 TDHQ8IZJ6 230 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 FBXO39Q8N4B4 442 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 MAGEC3Q8TD91 643 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 FAR2Q96K12 515 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 C3orf30Q96M34 536 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 KXD1Q9BQD3 176 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 FBRSL1Q9HCM7 1045 aaKnown RBP8.77□□□□□ -1.01
TDP1-210ENST00000554976 PRSS16Q9NQE7 514 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 CRLS1Q9UJA2 301 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 FNDC3AQ9Y2H6 1198 aaKnown RBP8.77□□□□□ -1.01
TDP1-210ENST00000554976 TRAF6Q9Y4K3 522 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 DNAJC15Q9Y5T4 150 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 SYCE1LA8MT33 242 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 K7EQS6 105 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 PSMC3P17980 439 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 CHRM3P20309 590 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 GCKP35557 465 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 CLNS1AP54105 237 aaKnown RBP8.77□□□□□ -1.01
TDP1-210ENST00000554976 CLCQ05315 142 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 KLF10Q13118 480 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 ELAVL3Q14576 367 aaKnown RBP8.77□□□□□ -1.01
TDP1-210ENST00000554976 TLDC1Q6P9B6 456 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 RNF165Q6ZSG1 346 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 ZNF765Q7L2R6 523 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 RBM15BQ8NDT2 890 aaKnown RBP8.77□□□□□ -1.01
TDP1-210ENST00000554976 FAM13CQ8NE31 585 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 SUSD6Q92537 303 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 DTD2Q96FN9 168 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 HDAC8Q9BY41 377 aa8.77□□□□□ -1.01
TDP1-210ENST00000554976 SUPT3HB4E1H0 165 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 E5RI56 91 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 E9PBE3 544 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 OR7A17O14581 309 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 NUAK1O60285 661 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 KLHL41O60662 606 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 SUPT3HO75486 399 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 PRNPP04156 253 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 ENO1P06733 434 aaKnown RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 ATP1B2P14415 290 aaPredicted RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 PRDX3P30048 256 aaKnown RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 ADSLP30566 484 aaPredicted RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 PPARGP37231 505 aaPredicted RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 NNMTP40261 264 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 KIR2DL1P43626 348 aaPredicted RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 RAP1GDS1P52306 607 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 HERC3Q15034 1050 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 C18orf21Q32NC0 220 aaPredicted RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 PIP5KL1Q5T9C9 394 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 EGFLAMQ63HQ2 1017 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 CLEC6AQ6EIG7 209 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 Q6ZVL8 140 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 SYVN1Q86TM6 617 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 SCAMP4Q969E2 229 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 RILPQ96NA2 401 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 ACOX2Q99424 681 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 MMADHCQ9H3L0 296 aaPredicted RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 RAD18Q9NS91 495 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 KLC4Q9NSK0 619 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 COPG1Q9Y678 874 aaKnown RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 GOLGA8QA0A0J9YX86 632 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 GOLGA8OA6NCC3 632 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 TRPC5OSA6NMA1 111 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 GOLGA8NF8WBI6 632 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 GPC4O75487 556 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 AP2A2O94973 939 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 ATP6V1G2O95670 118 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 MPC1LP0DKB6 136 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 ADRB3P13945 408 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 TSPAN8P19075 237 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 EPORP19235 508 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 DRD3P35462 400 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms