RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 KDELC1Q6UW63 502 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 C16orf89Q6UX73 402 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 USP30Q70CQ3 517 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 FAM124AQ86V42 546 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 CENPLQ8N0S6 344 aaPredicted RBP17.19■□□□□ 0.34
SHOX-204ENST00000554971 FBXW8Q8N3Y1 598 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 PEX13Q92968 403 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 NR1H4Q96RI1 486 aaPredicted RBP17.19■□□□□ 0.34
SHOX-204ENST00000554971 ZSCAN32Q9NX65 697 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 CPSF2Q9P2I0 782 aaKnown RBP17.19■□□□□ 0.34
SHOX-204ENST00000554971 TSPAN11A1L157 253 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 HRO43593 1189 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 FZD6O60353 706 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 PRLP01236 227 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 BCKDHBP21953 392 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 MAPK8P45983 427 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 WNT3AP56704 352 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 BCL2L1Q07817 233 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 CNGA3Q16281 694 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 SLC9B1Q4ZJI4 515 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 VWA5B1Q5TIE3 1220 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 ACVR1CQ8NER5 493 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 DTX3LQ8TDB6 740 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 KCTD4Q8WVF5 259 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 ZNF641Q96N77 438 aaPredicted RBP17.19■□□□□ 0.34
SHOX-204ENST00000554971 TDRD1Q9BXT4 1180 aaKnown RBP17.19■□□□□ 0.34
SHOX-204ENST00000554971 HDAC8Q9BY41 377 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 WSB2Q9NYS7 404 aaPredicted RBP17.19■□□□□ 0.34
SHOX-204ENST00000554971 RAI2Q9Y5P3 530 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 GVINP1Q7Z2Y8 2422 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 C10orf142B7Z368 130 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 SLC7A4O43246 635 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 SOCS5O75159 536 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 ZNF217O75362 1048 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 PMPCBO75439 489 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 SERPINF2P08697 491 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 RBP1P09455 135 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 ITGAXP20702 1163 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 ATP5F1P24539 256 aaPredicted RBP17.18■□□□□ 0.34
SHOX-204ENST00000554971 SERPINA4P29622 427 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 LEPRP48357 1165 aaKnown RBP17.18■□□□□ 0.34
SHOX-204ENST00000554971 NAGLUP54802 743 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 MTTPP55157 894 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 GALNT1Q10472 559 aaPredicted RBP17.18■□□□□ 0.34
SHOX-204ENST00000554971 FAM83EQ2M2I3 478 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 AGAP9Q5VTM2 703 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.18■□□□□ 0.34
SHOX-204ENST00000554971 ERN2Q76MJ5 926 aaKnown RBP17.18■□□□□ 0.34
SHOX-204ENST00000554971 SLC41A1Q8IVJ1 513 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 AFAP1L2Q8N4X5 818 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 TOE1Q96GM8 510 aaKnown RBP17.18■□□□□ 0.34
SHOX-204ENST00000554971 CLPTM1LQ96KA5 538 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 SMIM14Q96QK8 99 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 OMDQ99983 421 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 DKK3Q9UBP4 350 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 CDYLQ9Y232 598 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 MYLKQ15746 1914 aa17.18■□□□□ 0.34
SHOX-204ENST00000554971 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.17■□□□□ 0.34
SHOX-204ENST00000554971 TK2O00142 265 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 PHGDHO43175 533 aaKnown RBP17.17■□□□□ 0.34
SHOX-204ENST00000554971 DLX3O60479 287 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 LILRB5O75023 590 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 ADRB3P13945 408 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 TIMP2P16035 220 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 CES1P23141 567 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 SLC1A2P43004 574 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 ADPRHP54922 357 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 RPL26P61254 145 aaKnown RBP17.17■□□□□ 0.34
SHOX-204ENST00000554971 PTPRRQ15256 657 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 SMAD1Q15797 465 aaKnown RBP17.17■□□□□ 0.34
SHOX-204ENST00000554971 TSTD2Q5T7W7 516 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 CAPRIN2Q6IMN6 1127 aaKnown RBP17.17■□□□□ 0.34
SHOX-204ENST00000554971 KLC3Q6P597 504 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 POU5F2Q8N7G0 328 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 MAPK15Q8TD08 544 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 PPP1R16AQ96I34 528 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 TRIB3Q96RU7 358 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 FZD4Q9ULV1 537 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 PCDHB9Q9Y5E1 797 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 GOLGA8TH3BQL2 631 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 GRID2O43424 1007 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 ZBTB14O43829 449 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 PGLSO95336 258 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 PPARGP37231 505 aaPredicted RBP17.17■□□□□ 0.34
SHOX-204ENST00000554971 ABCG1P45844 678 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 CTBP1Q13363 440 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 USP39Q53GS9 565 aaKnown RBP17.17■□□□□ 0.34
SHOX-204ENST00000554971 ZNF470Q6ECI4 717 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 FRMD7Q6ZUT3 714 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 KBTBD6Q86V97 674 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 DENND6AQ8IWF6 608 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 DEFB107AQ8IZN7 70 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 ELMO2Q96JJ3 720 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 ZNF385DQ9H6B1 395 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 EML4Q9HC35 981 aaKnown RBP17.17■□□□□ 0.34
SHOX-204ENST00000554971 HACD3Q9P035 362 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 XPR1Q9UBH6 696 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 ITM2BQ9Y287 266 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 PCDHGA2Q9Y5H1 932 aa17.17■□□□□ 0.34
SHOX-204ENST00000554971 R4GN57 208 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms