RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 NUDT17P0C025 328 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 FMO4P31512 558 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 SPRP35270 261 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 PLOD1Q02809 727 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 UAP1Q16222 522 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 ZNF542PQ5EBM4 170 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 PRRT3Q5FWE3 981 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 CTSL3PQ5NE16 218 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 CRTC3Q6UUV7 619 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 SLC44A1Q8WWI5 657 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 AARSD1Q9BTE6 412 aaKnown RBP16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 LRRC61Q9BV99 259 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 TMEM168Q9H0V1 697 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 SMOC1Q9H4F8 434 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 LATS2Q9NRM7 1088 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 ARGLU1Q9NWB6 273 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 SLC17A6Q9P2U8 582 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 ZNF180Q9UJW8 692 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 IKBKGQ9Y6K9 419 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 LRP4O75096 1905 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 NEMP2A6NFY4 417 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 PCDHGA12O60330 932 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 INHBAP08476 426 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 CNTFP26441 200 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 EPHA8P29322 1005 aaPredicted RBP16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 SKIV2L2P42285 1042 aaKnown RBP16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 SERPINB9P50453 376 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 LIMK2P53671 638 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 ARHGAP8P85298 464 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 CTBSQ01459 385 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 RPA4Q13156 261 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 INSCQ1MX18 579 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 TCEAL6Q6IPX3 200 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 FAM45BPQ6NSW5 357 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 LVRNQ6Q4G3 990 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 CHST15Q7LFX5 561 aaPredicted RBP16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 MINDY1Q8N5J2 469 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 ZNF548Q8NEK5 533 aaPredicted RBP16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 FAM45AQ8TCE6 357 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 HM13Q8TCT9 377 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 TCEAL3Q969E4 200 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 TCEAL2Q9H3H9 227 aaPredicted RBP16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 SPATS2LQ9NUQ6 558 aaKnown RBP16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 DNAAF2Q9NVR5 837 aaKnown RBP16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 SLC24A2Q9UI40 661 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 PCDHGB2Q9Y5G2 931 aa16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 PCYT1BQ9Y5K3 369 aaPredicted RBP16.17■□□□□ 0.18
SPTLC2-203ENST00000554901 PRR19A6NJB7 356 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 E5RI56 91 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 LMO7DNF2Z398 122 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 LIN7AO14910 233 aaPredicted RBP16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 AQP9O43315 295 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 TCEA3O75764 348 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 ACP5P13686 325 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 TGM1P22735 817 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 DGKAP23743 735 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 MSH2P43246 934 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 RASA2Q15283 850 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 SHBQ15464 509 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 UGT3A1Q6NUS8 523 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 ZNF549Q6P9A3 640 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 TAOK1Q7L7X3 1001 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 GKN2Q86XP6 184 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 VPS39Q96JC1 886 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 PAFAH2Q99487 392 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 GTPBP2Q9BX10 602 aaKnown RBP16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 FSCN3Q9NQT6 498 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 TAS2R13Q9NYV9 303 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 ACSL5Q9ULC5 683 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 PRKAB1Q9Y478 270 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 MYO15AQ9UKN7 3530 aa16.16■□□□□ 0.18
SPTLC2-203ENST00000554901 TPP1O14773 563 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 VPS26AO75436 327 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 PIAS1O75925 651 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 CHRM3P20309 590 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 SLC14A1Q13336 389 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 SUZ12Q15022 739 aaKnown RBP16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 EFTUD2Q15029 972 aaKnown RBP eCLIP16.15■□□□□ 0.182e-8■■■■■ 46.9
SPTLC2-203ENST00000554901 SF3A2Q15428 464 aaKnown RBP16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 ZNF658BQ4V348 819 aaPredicted RBP16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 PRAMEF14Q5SWL7 426 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 BEND6Q5SZJ8 279 aaPredicted RBP16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 METRNLQ641Q3 311 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 WASH2PQ6VEQ5 465 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 PRR23CQ6ZRP0 262 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 BEND7Q8N7W2 519 aaPredicted RBP16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 UHMK1Q8TAS1 419 aaKnown RBP16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 LMX1AQ8TE12 382 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 SAP25Q8TEE9 199 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 ASZ1Q8WWH4 475 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 GPR22Q99680 433 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 DHRS4Q9BTZ2 278 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 PARD6AQ9NPB6 346 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 WASH6PQ9NQA3 447 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 TM7SF3Q9NS93 570 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 KLC4Q9NSK0 619 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 GULP1Q9UBP9 304 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 SLC23A2Q9UGH3 650 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 PCOLCE2Q9UKZ9 415 aa16.15■□□□□ 0.18
SPTLC2-203ENST00000554901 VWA7Q9Y334 891 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms