RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 MSH3P20585 1137 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 MPSTP25325 297 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 MSNP26038 577 aaKnown RBP8.57□□□□□ -1.04
ACTN1-213ENST00000554508 RPL10P27635 214 aaKnown RBP8.57□□□□□ -1.04
ACTN1-213ENST00000554508 AKT1P31749 480 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 HALP42357 657 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 RAB15P59190 212 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 XIAPP98170 497 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 PTPRCAPQ14761 206 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 RPS6KA1Q15418 735 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 P3H1Q32P28 736 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 KCTD11Q693B1 232 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 DENND5AQ6IQ26 1287 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 DTX1Q86Y01 620 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 C17orf53Q8N3J3 647 aaPredicted RBP8.57□□□□□ -1.04
ACTN1-213ENST00000554508 BEND7Q8N7W2 519 aaPredicted RBP8.57□□□□□ -1.04
ACTN1-213ENST00000554508 RASGEF1AQ8N9B8 481 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 FAM71DQ8N9W8 422 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 HEXDCQ8WVB3 486 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 ULK4Q96C45 1275 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 CXorf40BQ96DE9 158 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 BBC3Q96PG8 261 aaPredicted RBP8.57□□□□□ -1.04
ACTN1-213ENST00000554508 TEFMQ96QE5 360 aaKnown RBP8.57□□□□□ -1.04
ACTN1-213ENST00000554508 APOL2Q9BQE5 337 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 ZPBPQ9BS86 351 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 DDA1Q9BW61 102 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 LRRC40Q9H9A6 602 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 SLC40A1Q9NP59 571 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 FBXO8Q9NRD0 319 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 SLC39A1Q9NY26 324 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 FOXJ2Q9P0K8 574 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 TMEM9Q9P0T7 183 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 COL6A6A6NMZ7 2263 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 ATRXP46100 2492 aa8.57□□□□□ -1.04
ACTN1-213ENST00000554508 MN1Q10571 1320 aaPredicted RBP8.56□□□□□ -1.04
ACTN1-213ENST00000554508 MGAQ8IWI9 3026 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 TCRBV7S2A1N4TA0A589 114 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 OR2AG2A6NM03 316 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 EFCAB7A8K855 629 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 ERI2A8K979 691 aaKnown RBP8.56□□□□□ -1.04
ACTN1-213ENST00000554508 A8MU76 341 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 STMND1H3BQB6 276 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 LDB2O43679 373 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 METTL18O95568 372 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 ANKRD34CP0C6C1 535 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 BRAFP15056 766 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 ITGALP20701 1170 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 MAPK9P45984 424 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 CTSCP53634 463 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 DRG2P55039 364 aaKnown RBP8.56□□□□□ -1.04
ACTN1-213ENST00000554508 MC2RQ01718 297 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 OLIG2Q13516 323 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 SPARCL1Q14515 664 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 CLCA4Q14CN2 919 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 SEPT7Q16181 437 aaKnown RBP8.56□□□□□ -1.04
ACTN1-213ENST00000554508 GPR33Q49SQ1 333 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 SNAP47Q5SQN1 464 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 MANEAQ5SRI9 462 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 DCAF12Q5T6F0 453 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 METRNLQ641Q3 311 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 CEACAM20Q6UY09 585 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 SNX20Q7Z614 316 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 LINC00523Q86TU6 105 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 ZFAND4Q86XD8 727 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 SLC35F6Q8N357 371 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 ZSCAN1Q8NBB4 408 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 OR13C4Q8NGS5 318 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 OR2L2Q8NH16 312 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 ZFPM2Q8WW38 1151 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 SLC39A7Q92504 469 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 ART4Q93070 314 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 RTP4Q96DX8 246 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 SGF29Q96ES7 293 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 DCUN1D1Q96GG9 259 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 LINC00615Q96LM1 132 aaPredicted RBP8.56□□□□□ -1.04
ACTN1-213ENST00000554508 TMEM121Q9BTD3 319 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 RAB33BQ9H082 229 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 OCIAD1Q9NX40 245 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 FKBPLQ9UIM3 349 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 CRLS1Q9UJA2 301 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 ACSL5Q9ULC5 683 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 R3HDM2Q9Y2K5 976 aaKnown RBP8.56□□□□□ -1.04
ACTN1-213ENST00000554508 JRKLQ9Y4A0 524 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 KCTD3Q9Y597 815 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 B3GALT1Q9Y5Z6 326 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 SLC30A1Q9Y6M5 507 aa8.56□□□□□ -1.04
ACTN1-213ENST00000554508 LOC400499M0QZD8 3231 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 MGAT4DA6NG13 374 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 OR52A4PA6NMU1 304 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 CFAP99D6REC4 459 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 H7C0S8 307 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 GPR39O43194 453 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 EFSO43281 561 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 LIASO43766 372 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 AP2A1O95782 977 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 TYRP1P17643 537 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 CA5AP35218 305 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 FDFT1P37268 417 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 ATP1A2P50993 1020 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 ZNF140P52738 457 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms