RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 PRMT8Q9NR22 394 aaPredicted RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 MBNL1Q9NR56 388 aaKnown RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 SLC17A7Q9P2U7 560 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 COPG2Q9UBF2 871 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 EMCNQ9ULC0 261 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 HS3ST3A1Q9Y663 406 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 DNMT3AQ9Y6K1 912 aaPredicted RBP7.54□□□□□ -1.2
TDP1-209ENST00000554180 TECTAO75443 2155 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 NUMA1Q14980 2115 aa7.54□□□□□ -1.2
TDP1-209ENST00000554180 OR2AG2A6NM03 316 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 IQCF5A8MTL0 148 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 PRAMEF26H0Y7S4 382 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 KLF11O14901 512 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 LIN7AO14910 233 aaPredicted RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 AXIN1O15169 862 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 RAD51BO15315 384 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 SLC31A1O15431 190 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 NUAK1O60285 661 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 KCNJ13O60928 360 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 LILRB5O75023 590 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 H2AFYO75367 372 aaKnown RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 TOP3BO95985 862 aaKnown RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 IGHV4-34P06331 123 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 TFEBP19484 476 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 AOAHP28039 575 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 MAT2AP31153 395 aaKnown RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 CCR7P32248 378 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 SERPINB4P48594 390 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 CTSCP53634 463 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 PRKAA2P54646 552 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 YPEL5P62699 121 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 GUCY1A3Q02108 690 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 DLG1Q12959 904 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 SP140Q13342 867 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 PDK4Q16654 411 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 USP39Q53GS9 565 aaKnown RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 TECRLQ5HYJ1 363 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 TMEM220Q6QAJ8 160 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 ZYG11AQ6WRX3 759 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 SLC36A4Q6YBV0 504 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 DET1Q7L5Y6 550 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 ABI3BPQ7Z7G0 1075 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 TRAPPC5Q8IUR0 188 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 MYO1HQ8N1T3 1032 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 FSTL5Q8N475 847 aaPredicted RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 OXR1Q8N573 874 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 ARMC2Q8NEN0 867 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 STAG3L4Q8TBR4 150 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 LKAAEAR1Q8TD35 194 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 MGARPQ8TDB4 240 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 ASZ1Q8WWH4 475 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 CKAP2Q8WWK9 683 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 FOXJ1Q92949 421 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 GLMNQ92990 594 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 KIAA1191Q96A73 305 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 FUBP1Q96AE4 644 aaKnown RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 NXNL1Q96CM4 212 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 CCDC126Q96EE4 140 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 LINGO1Q96FE5 620 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 SCARF2Q96GP6 870 aaPredicted RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 MAGEB18Q96M61 343 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 NECAB3Q96P71 396 aaPredicted RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 SLC30A3Q99726 388 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 CCM2Q9BSQ5 444 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 APOOQ9BUR5 198 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 GPR174Q9BXC1 333 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 TPSD1Q9BZJ3 242 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 C6orf106Q9H6K1 298 aaPredicted RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 ZNF358Q9NW07 568 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 TMEM216Q9P0N5 145 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 SIRPGQ9P1W8 387 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 ATXN10Q9UBB4 475 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 XPR1Q9UBH6 696 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 TMCO1Q9UM00 188 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 RUVBL2Q9Y230 463 aaKnown RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 SLC17A4Q9Y2C5 497 aa7.53□□□□□ -1.2
TDP1-209ENST00000554180 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.53□□□□□ -1.2
TDP1-209ENST00000554180 PLXNB3Q9ULL4 1909 aa7.52□□□□□ -1.2
TDP1-209ENST00000554180 VCANP13611 3396 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 A0A1W2PPC4 97 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 MGAT4DA6NG13 374 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 TMEM221A6NGB7 291 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 SYCE1LA8MT33 242 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 TARM1B6A8C7 271 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 M0R296 226 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 TK2O00142 265 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 TNFRSF10CO14798 259 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 KMOO15229 486 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 ZBTB14O43829 449 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 KERAO60938 352 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 DNAJC6O75061 913 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 NDUFS2O75306 463 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 GPC4O75487 556 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 SLCO2B1O94956 709 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 FSBPO95073 299 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 PDGFBP01127 241 aaPredicted RBP7.52□□□□□ -1.21
TDP1-209ENST00000554180 BPGMP07738 259 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 ENO2P09104 434 aaPredicted RBP7.52□□□□□ -1.21
TDP1-209ENST00000554180 MPC1LP0DKB6 136 aa7.52□□□□□ -1.21
TDP1-209ENST00000554180 MYL2P10916 166 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms