RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 IL26Q9NPH9 171 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 EIF2B3Q9NR50 452 aaKnown RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 AKAP7Q9P0M2 348 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 ATXN10Q9UBB4 475 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 RNF14Q9UBS8 474 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 ANAPC5Q9UJX4 755 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 CLCA2Q9UQC9 943 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 SAR1BQ9Y6B6 198 aa8.23□□□□□ -1.09
PSEN1-209ENST00000553855 ASCC3Q8N3C0 2202 aaKnown RBP8.23□□□□□ -1.09
PSEN1-209ENST00000553855 TMEM131Q92545 1883 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 KLHL33A6NCF5 533 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 PDZK1P1A8MUH7 402 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 TMX2-CTNND1H3BSU7 103 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 PFDN6O15212 129 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 NUDT21O43809 227 aaKnown RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 OPA1O60313 960 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 UGT1A9O60656 530 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 DNAJC6O75061 913 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 PHF2O75151 1096 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 MTX2O75431 263 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 TCEA3O75764 348 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 KRT37O76014 449 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 SUN1O94901 812 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 ZSCAN5DPP0CG00 497 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 GIMD1P0DJR0 217 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 MYF5P13349 255 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 ETS1P14921 441 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 ZNF7P17097 686 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 ZNF8P17098 575 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 UGT1A6P19224 532 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 SPINK2P20155 84 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 IDSP22304 550 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 UGT1A1P22309 533 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 UGT1A4P22310 534 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 ADRA1DP25100 572 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 AK4P27144 223 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 CASQ1P31415 396 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 MC4RP32245 332 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 UGT1A3P35503 534 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 UGT1A5P35504 534 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 COILP38432 576 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 HALP42357 657 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 NPY2RP49146 381 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 FNTAP49354 379 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 VPS41P49754 854 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 PRAMEP78395 509 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 GPS1Q13098 491 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 NFATC2Q13469 925 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 OLIG2Q13516 323 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 SIX1Q15475 284 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 AARS2Q5JTZ9 985 aaKnown RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 LYPLAL1Q5VWZ2 237 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 KCTD11Q693B1 232 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 DENND5AQ6IQ26 1287 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 OGFOD3Q6PK18 319 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 RBM44Q6ZP01 1051 aaKnown RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 SNX20Q7Z614 316 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 KLHDC8BQ8IXV7 354 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 Q8N9G6 341 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 KYQ8NBH2 561 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 DDHD1Q8NEL9 900 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 GPR156Q8NFN8 814 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 OR13C4Q8NGS5 318 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 CCL4L1Q8NHW4 92 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 GRAMD1AQ96CP6 724 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 AHCYL2Q96HN2 611 aaKnown RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 MS4A14Q96JA4 679 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 TMEM74Q96NL1 305 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 CNTNAP3BQ96NU0 1288 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 GFM1Q96RP9 751 aaKnown RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 COPS8Q99627 209 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 CCDC3Q9BQI4 270 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 GORASP1Q9BQQ3 440 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 TRIM56Q9BRZ2 755 aaKnown RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 TIMM29Q9BSF4 260 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 CNTNAP3Q9BZ76 1288 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 UGT1A7Q9HAW7 530 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 UGT1A10Q9HAW8 530 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 UGT1A8Q9HAW9 530 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 ARFGAP3Q9NP61 516 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 KLC4Q9NSK0 619 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 NLE1Q9NVX2 485 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 SAMD15Q9P1V8 674 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 LRIT1Q9P2V4 623 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 KLK13Q9UKR3 277 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 CNOT6Q9ULM6 557 aaKnown RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 PNMA8BQ9ULN7 279 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 PYCARDQ9ULZ3 195 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 KCNK6Q9Y257 313 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 PRKAB1Q9Y478 270 aa8.22□□□□□ -1.09
PSEN1-209ENST00000553855 OAS3Q9Y6K5 1087 aaKnown RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 COL5A1P20908 1838 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-209ENST00000553855 KIR2DS5A0A0G2JLQ3 304 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 A0A0G2JNG1 304 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 SLC35F4A4IF30 521 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 TMEM8BA6NDV4 472 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 USP27XA6NNY8 438 aa8.21□□□□□ -1.1
PSEN1-209ENST00000553855 KIR2DS3K7RE56 304 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms