RNA–Protein interactions for RNA: ENST00000553406.1

DDHD1-204, Transcript of DDHD domain containing 1, human

TSL 3

Gene DDHD1, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDHD1-204	ENST00000553406	FAM86B2	P0C5J1	330 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	SUPT20HL2	P0C7V6	817 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	ZNF286B	P0CG31	522 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	ACP5	P13686	325 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	FDPS	P14324	419 aa	Known RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	GCFC2	P16383	781 aa	Known RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	ZNF12	P17014	697 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	ITGB8	P26012	769 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	RFC1	P35251	1148 aa	Predicted RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	SKIV2L2	P42285	1042 aa	Known RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	COMP	P49747	757 aa	Predicted RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	SLC26A2	P50443	739 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	PDLIM4	P50479	330 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	SH3BGR	P55822	239 aa	Predicted RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	ITGB3BP	Q13352	177 aa	Predicted RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	THOC5	Q13769	683 aa	Known RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	BLMH	Q13867	455 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	CRYM	Q14894	314 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	SMAD1	Q15797	465 aa	Known RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	LRIT3	Q3SXY7	679 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	CCDC38	Q502W7	563 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	CCDC73	Q6ZRK6	1079 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	CLEC17A	Q6ZS10	378 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	H1FNT	Q75WM6	255 aa	Predicted RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	TRIM74	Q86UV6	250 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	TRIM73	Q86UV7	250 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	SERINC5	Q86VE9	423 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	FJX1	Q86VR8	437 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	APLF	Q8IW19	511 aa	Predicted RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	TDH	Q8IZJ6	230 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	CACNA2D3	Q8IZS8	1091 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	BLID	Q8IZY5	108 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	RBFA	Q8N0V3	343 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	PDILT	Q8N807	584 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	OR6Y1	Q8NGX8	325 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	KIF18A	Q8NI77	898 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	ETNPPL	Q8TBG4	499 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	AFAP1L1	Q8TED9	768 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	DTNBP1	Q96EV8	351 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	SPATA33	Q96N06	139 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	RPS6KC1	Q96S38	1066 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	HOMER3	Q9NSC5	361 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	THAP1	Q9NVV9	213 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	KCNG2	Q9UJ96	466 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	KCND3	Q9UK17	655 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	ZNF215	Q9UL58	517 aa	Predicted RBP	4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	ICAM5	Q9UMF0	924 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	DHDH	Q9UQ10	334 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	NCOR1	O75376	2440 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	COL1A2	P08123	1366 aa		4.36	□□□□□ -1.71
DDHD1-204	ENST00000553406	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	ERICH4	A6NGS2	130 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	IPO5	O00410	1097 aa	Known RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	JAK2	O60674	1132 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	ATP9A	O75110	1047 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	LDB3	O75112	727 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	ZBTB11	O95625	1053 aa	Predicted RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	CCNE2	O96020	404 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	TIMP1	P01033	207 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	CCDC175	P0C221	793 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	ARSA	P15289	507 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	XBP1	P17861	261 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	PAX3	P23760	479 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	U2AF2	P26368	475 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	YWHAQ	P27348	245 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	AVPR2	P30518	371 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	RFC2	P35250	354 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	GJC1	P36383	396 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	TCF7	P36402	384 aa	Predicted RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	DPP6	P42658	865 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	GPR12	P47775	334 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	HNRNPH2	P55795	449 aa	Known RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	ERVFC1-1	P60608	527 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	ACTR2	P61160	394 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	PSMC6	P62333	389 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	POU3F1	Q03052	451 aa	Predicted RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	COASY	Q13057	564 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	ORC2	Q13416	577 aa	Predicted RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	PPIG	Q13427	754 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	SLMAP	Q14BN4	828 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	NONO	Q15233	471 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	RUNDC3A	Q59EK9	446 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	RRAGA	Q7L523	313 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	MYLK4	Q86YV6	388 aa	Predicted RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	CCDC50	Q8IVM0	306 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	C10orf67	Q8IYJ2	551 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	GBP7	Q8N8V2	638 aa	Predicted RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	CCDC112	Q8NEF3	446 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	RDM1	Q8NG50	284 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	TMEM18	Q96B42	140 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	DUX5	Q96PT3	197 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	FIZ1	Q96SL8	496 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	PCYT2	Q99447	389 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	RIT2	Q99578	217 aa		4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	NAP1L4	Q99733	375 aa	Known RBP	4.35	□□□□□ -1.71
DDHD1-204	ENST00000553406	SDF4	Q9BRK5	362 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms