RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 NHLRC4P0CG21 123 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-208ENST00000553278 ACAT1P24752 427 aaKnown RBP5.68□□□□□ -1.5
SCFD1-208ENST00000553278 PIGAP37287 484 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 WNT5AP41221 380 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 ASCL1P50553 236 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 FOXM1Q08050 763 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 CDSNQ15517 529 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 SMTNL2Q2TAL5 461 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 EPHA10Q5JZY3 1008 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 PIK3CD-AS1Q5SR53 167 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 CASC4Q6P4E1 433 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 LCNL1Q6ZST4 164 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 FAM219AQ8IW50 185 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 HDDC3Q8N4P3 179 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 EMC1Q8N766 993 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 UXS1Q8NBZ7 420 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 PAPD5Q8NDF8 572 aaKnown RBP5.68□□□□□ -1.5
SCFD1-208ENST00000553278 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-208ENST00000553278 HASPINQ8TF76 798 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 ORAI1Q96D31 301 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 MUS81Q96NY9 551 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 PKP4Q99569 1192 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 SEMA3CQ99985 751 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 DUSP26Q9BV47 211 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 GTPBP2Q9BX10 602 aaKnown RBP5.68□□□□□ -1.5
SCFD1-208ENST00000553278 MINDY3Q9H8M7 445 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 SEBOXQ9HB31 216 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-208ENST00000553278 ASB6Q9NWX5 421 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 COMMD8Q9NX08 183 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 TBC1D7Q9P0N9 293 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 COG5Q9UP83 839 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 ATP6V0A2Q9Y487 856 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 ASTN2O75129 1339 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-208ENST00000553278 PTGESO14684 152 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 SPINT2O43291 252 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 ZNF217O75362 1048 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 MED24O75448 989 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 HRH2P25021 359 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 ZNF81P51508 661 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 POLR2FP61218 127 aaKnown RBP5.67□□□□□ -1.5
SCFD1-208ENST00000553278 HNRNPKP61978 463 aaKnown RBP eCLIP5.67□□□□□ -1.5
SCFD1-208ENST00000553278 RPS13P62277 151 aaKnown RBP5.67□□□□□ -1.5
SCFD1-208ENST00000553278 CFHR1Q03591 330 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 KCNT1Q5JUK3 1230 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 MIIPQ5JXC2 388 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 SPOUT1Q5T280 376 aaKnown RBP5.67□□□□□ -1.5
SCFD1-208ENST00000553278 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 FRG2Q64ET8 278 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 LCN10Q6JVE6 187 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 DUS1LQ6P1R4 473 aaKnown RBP5.67□□□□□ -1.5
SCFD1-208ENST00000553278 ENPP7Q6UWV6 458 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 ZNF793Q6ZN11 406 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 LCA5Q86VQ0 697 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 C8orf58Q8NAV2 365 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 GPT2Q8TD30 523 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 ST7LQ8TDW4 575 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 NSMAFQ92636 917 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 ST6GALNAC6Q969X2 333 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 OTUB1Q96FW1 271 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-208ENST00000553278 GRAMD2BQ96HH9 432 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 C16orf45Q96MC5 204 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-208ENST00000553278 SFXN2Q96NB2 322 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 OR6C1Q96RD1 312 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 KCNN2Q9H2S1 579 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 MMRN2Q9H8L6 949 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 MMP25Q9NPA2 562 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 TMEM51Q9NW97 253 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 FLRT1Q9NZU1 646 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 KLHL13Q9P2N7 655 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 FETUBQ9UGM5 382 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 FBXL5Q9UKA1 691 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 FBXW2Q9UKT8 454 aa5.67□□□□□ -1.5
SCFD1-208ENST00000553278 SDR42E2A6NKP2 422 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 TMEM189-UBE2V1I3L0A0 370 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 J3QR06 171 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 MEIS2O14770 477 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 NDC80O14777 642 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 ST8SIA3O43173 380 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 XRCC3O43542 346 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 CRCPO75575 148 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 PGLSO95336 258 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 GUCA1CO95843 209 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 PLA2G4BP0C869 781 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 ZNF20P17024 532 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 CHRNB2P17787 502 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 CYP11B2P19099 503 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 AZGP1P25311 298 aaKnown RBP5.66□□□□□ -1.5
SCFD1-208ENST00000553278 HOXD9P28356 352 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-208ENST00000553278 FRKP42685 505 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-208ENST00000553278 FASLGP48023 281 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 COMPP49747 757 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-208ENST00000553278 LUMP51884 338 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-208ENST00000553278 HSD17B7P56937 341 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 UBE2V1Q13404 147 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 DECR1Q16698 335 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 SYT16Q17RD7 645 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 HFEQ30201 348 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 ALS2CLQ60I27 953 aa5.66□□□□□ -1.5
SCFD1-208ENST00000553278 KCTD18Q6PI47 426 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-208ENST00000553278 ABRAXAS1Q6UWZ7 409 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms