RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 CA5BP1Q8WTZ4 195 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 INPP5DQ92835 1189 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 EEF2KMTQ96G04 330 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 CCDC140Q96MF4 163 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 LRFN5Q96NI6 719 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 AGAP4Q96P64 663 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 TGM7Q96PF1 710 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 LMF1Q96S06 567 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 SECISBP2Q96T21 854 aaKnown RBP5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ARPC5LQ9BPX5 153 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 C17orf62Q9BQA9 187 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 DPH2Q9BQC3 489 aaPredicted RBP5.08□□□□□ -1.6
CKAP4-203ENST00000553039 HERPUD2Q9BSE4 406 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ZYG11BQ9C0D3 744 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 TKTL2Q9H0I9 626 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 MAGEH1Q9H213 219 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 CHST8Q9H2A9 424 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 MMRN2Q9H8L6 949 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ASNSD1Q9NWL6 643 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 MPP6Q9NZW5 540 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 WHRNQ9P202 907 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 EPHA6Q9UF33 1036 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 NDOR1Q9UHB4 597 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 AJAP1Q9UKB5 411 aaPredicted RBP5.08□□□□□ -1.6
CKAP4-203ENST00000553039 SLC17A4Q9Y2C5 497 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 EMC9Q9Y3B6 208 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 CNTRLQ7Z7A1 2325 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ZGRF1Q86YA3 2104 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ATRQ13535 2644 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 TNRC6AQ8NDV7 1962 aaKnown RBP5.07□□□□□ -1.6
CKAP4-203ENST00000553039 IGLV3-10A0A075B6K4 115 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 TCRBV16S1A1N1A0A5B0 115 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 CCDC189A1A4V9 331 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 LILRA5A6NI73 299 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 C9J4A7 227 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 C19orf84I3L1E1 186 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 MED7O43513 233 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 KDELR3O43731 214 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 MAN1A2O60476 641 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 DLX3O60479 287 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 HSF2BPO75031 334 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 SCRG1O75711 98 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ZWINTO95229 277 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 CD160O95971 181 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 VIPP01282 170 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 PYGLP06737 847 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 XRCC1P18887 633 aaPredicted RBP5.07□□□□□ -1.6
CKAP4-203ENST00000553039 AGXTP21549 392 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 TEAD1P28347 426 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ADH7P40394 386 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 GPD2P43304 727 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 CXCR3P49682 368 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 IRAK1P51617 712 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 RHOAP61586 193 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ADCY2Q08462 1091 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 FAPQ12884 760 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 AIMP2Q13155 320 aaKnown RBP5.07□□□□□ -1.6
CKAP4-203ENST00000553039 TUBB3Q13509 450 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ATP1A4Q13733 1029 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 LAMB3Q13751 1172 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 PLCL1Q15111 1095 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 CEBPEQ15744 281 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 TMTC4Q5T4D3 741 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ATXN7L2Q5T6C5 722 aaPredicted RBP5.07□□□□□ -1.6
CKAP4-203ENST00000553039 AFMIDQ63HM1 303 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 KLHL35Q6PF15 583 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 POMZP3Q6PJE2 187 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 TMEM270Q6UE05 265 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 UBE2R2Q712K3 238 aaPredicted RBP5.07□□□□□ -1.6
CKAP4-203ENST00000553039 PRSS42Q7Z5A4 293 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ZNF354CQ86Y25 554 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 DNAAF5Q86Y56 855 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 KMT5CQ86Y97 462 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 GALNT13Q8IUC8 556 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 TMEM126BQ8IUX1 230 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 TRIM59Q8IWR1 403 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ARHGEF39Q8N4T4 335 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 PDILTQ8N807 584 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ACBD4Q8NC06 268 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 OR1N1Q8NGS0 311 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 TMEM158Q8WZ71 300 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 TFAP2BQ92481 460 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 CPT1BQ92523 772 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 SEMA4DQ92854 862 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 NACC2Q96BF6 587 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 RNF31Q96EP0 1072 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 SCARF2Q96GP6 870 aaPredicted RBP5.07□□□□□ -1.6
CKAP4-203ENST00000553039 VPS50Q96JG6 964 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 CNDP1Q96KN2 507 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 MAGEB10Q96LZ2 347 aaPredicted RBP5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ALPK1Q96QP1 1244 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 OR2M4Q96R27 311 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 RUFY1Q96T51 708 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 MLPHQ9BV36 600 aaPredicted RBP5.07□□□□□ -1.6
CKAP4-203ENST00000553039 SARGQ9BW04 601 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 FRMD8Q9BZ67 464 aaPredicted RBP5.07□□□□□ -1.6
CKAP4-203ENST00000553039 EPS8L2Q9H6S3 715 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 ANLNQ9NQW6 1124 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 COQ3Q9NZJ6 369 aa5.07□□□□□ -1.6
CKAP4-203ENST00000553039 CPNE7Q9UBL6 633 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms