RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 GLYATL1Q969I3 302 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 HES6Q96HZ4 224 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 TIMM29Q9BSF4 260 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 SPATA16Q9BXB7 569 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 OSBPL8Q9BZF1 889 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 RAB33BQ9H082 229 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 MAGEE1Q9HCI5 957 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 SLC40A1Q9NP59 571 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 WASH6PQ9NQA3 447 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 RAD18Q9NS91 495 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 SEMA5BQ9P283 1151 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 EPHA6Q9UF33 1036 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 CROTQ9UKG9 612 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 PACSIN2Q9UNF0 486 aaPredicted RBP11.65□□□□□ -0.54
CKAP4-202ENST00000552828 PLAAQ9Y263 795 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 TP53TG5Q9Y2B4 290 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 PCDHB3Q9Y5E6 796 aa11.65□□□□□ -0.54
CKAP4-202ENST00000552828 MKRN2OSH3BPM6 223 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 K7EM74 188 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 KMOO15229 486 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 DDX3YO15523 660 aaKnown RBP11.64□□□□□ -0.55
CKAP4-202ENST00000552828 ZSCAN12O43309 604 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 VEGFDO43915 354 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 TJP3O95049 919 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 VIPP01282 170 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 FURINP09958 794 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 PYGMP11217 842 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 BRAFP15056 766 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 ZNF7P17097 686 aaPredicted RBP11.64□□□□□ -0.55
CKAP4-202ENST00000552828 TYRP1P17643 537 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 PTPN7P35236 360 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 CAPZBP47756 277 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 LEPRP48357 1165 aaKnown RBP11.64□□□□□ -0.55
CKAP4-202ENST00000552828 SH3BP2P78314 561 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 ADCY2Q08462 1091 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 ZNF648Q5T619 568 aaPredicted RBP11.64□□□□□ -0.55
CKAP4-202ENST00000552828 BBS12Q6ZW61 710 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 ZNF547Q8IVP9 402 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 GALNT6Q8NCL4 622 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 TADA1Q96BN2 335 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 IMP4Q96G21 291 aaKnown RBP11.64□□□□□ -0.55
CKAP4-202ENST00000552828 OLFM3Q96PB7 478 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 TGM7Q96PF1 710 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 OR6C1Q96RD1 312 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 KCNF1Q9H3M0 494 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 ARFGAP3Q9NP61 516 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 POT1Q9NUX5 634 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 SAE1Q9UBE0 346 aaPredicted RBP11.64□□□□□ -0.55
CKAP4-202ENST00000552828 KCND3Q9UK17 655 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 POLHQ9Y253 713 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 NOTCH2Q04721 2471 aa11.64□□□□□ -0.55
CKAP4-202ENST00000552828 PRRC2CQ9Y520 2896 aaKnown RBP11.64□□□□□ -0.55
CKAP4-202ENST00000552828 APOC4-APOC2K7ER74 178 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 KCNK1O00180 336 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 KIF1CO43896 1103 aaKnown RBP11.63□□□□□ -0.55
CKAP4-202ENST00000552828 SPAG6O75602 509 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 KIAA0754O94854 1291 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 APOC2P02655 101 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 ATXN8OSP0DMR3 200 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 PECAM1P16284 738 aaPredicted RBP11.63□□□□□ -0.55
CKAP4-202ENST00000552828 AMD1P17707 334 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 NELFEP18615 380 aaKnown RBP11.63□□□□□ -0.55
CKAP4-202ENST00000552828 PMS2P54278 862 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 ZBTB17Q13105 803 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 ERV3-1Q14264 604 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 GALNT3Q14435 633 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 RPS6KA1Q15418 735 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 SLC14A2Q15849 920 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 INSCQ1MX18 579 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 C11orf96Q7Z7L8 435 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 LRRTM4Q86VH4 590 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 APLFQ8IW19 511 aaPredicted RBP11.63□□□□□ -0.55
CKAP4-202ENST00000552828 TRIM48Q8IWZ4 208 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 TRIM58Q8NG06 486 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 TFB1MQ8WVM0 346 aaKnown RBP11.63□□□□□ -0.55
CKAP4-202ENST00000552828 RSC1A1Q92681 617 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 STAMBPL1Q96FJ0 436 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 ZDHHC12Q96GR4 267 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 FCRL4Q96PJ5 515 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 OSGEPL1Q9H4B0 414 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 TMPRSS11EQ9UL52 423 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 PADI1Q9ULC6 663 aa11.63□□□□□ -0.55
CKAP4-202ENST00000552828 GOLGA6L9A6NEM1 432 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 PDZK1P1A8MUH7 402 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 HACD1B0YJ81 288 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 C21orf140B9A014 251 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 MTSS1O43312 755 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 KCNJ13O60928 360 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 CREG1O75629 220 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 RFPL1O75677 317 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 MT-ND3P03897 115 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 CCNYL3P0C7X3 344 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 BPIP17213 487 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 IDSP22304 550 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 SEPHS1P49903 392 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 CDK18Q07002 472 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 XRCC4Q13426 336 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 GPR18Q14330 331 aa11.62□□□□□ -0.55
CKAP4-202ENST00000552828 KHDC1Q4VXA5 237 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms