RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 SHEQ5VZ18 495 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 HEPHL1Q6MZM0 1159 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 PIM3Q86V86 326 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 OR7G3Q8NG95 312 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 OR8K5Q8NH50 307 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 HUS1BQ8NHY5 278 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 OCC1Q8TAD7 63 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 C9orf43Q8TAL5 461 aaPredicted RBP4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 ASB5Q8WWX0 329 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 KAT2BQ92831 832 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 DNASE1L2Q92874 299 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 SNAPC3Q92966 411 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 EXT2Q93063 718 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 FBXL8Q96CD0 374 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 TRIM44Q96DX7 344 aaPredicted RBP4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 SPACA9Q96E40 222 aaPredicted RBP4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 RBM18Q96H35 190 aaKnown RBP4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 SLC41A2Q96JW4 573 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 HARBI1Q96MB7 349 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 NUDCD1Q96RS6 583 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 PKP4Q99569 1192 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 INPP5KQ9BT40 448 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 KRT23Q9C075 422 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 ABCG8Q9H221 673 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 PPIL3Q9H2H8 161 aaKnown RBP4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 DCAF16Q9NXF7 216 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 LARSQ9P2J5 1176 aaKnown RBP4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 FETUBQ9UGM5 382 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 CHKBQ9Y259 395 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 IKBKGQ9Y6K9 419 aa4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.57□□□□□ -1.68
RAB3IP-214ENST00000550847 C1orf226A1L170 272 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 K7EPI3 171 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 SLC25A17O43808 307 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 KLK8O60259 260 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 RSL1D1O76021 490 aaKnown RBP4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 HEXBP07686 556 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 TPM2P07951 284 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 VPREB1P12018 145 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 HOXB2P14652 356 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 PFKFB1P16118 471 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 GJA1P17302 382 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 SRD5A1P18405 259 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 CCNA2P20248 432 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 CHRNA5P30532 468 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 SOAT1P35610 550 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 PRCPP42785 496 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 THBS3P49746 956 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 ST8SIA6P61647 398 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 VWC2Q2TAL6 325 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 PRTGQ2VWP7 1150 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 ANKDD1AQ495B1 522 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 ATP13A5Q4VNC0 1218 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 SYTL3Q4VX76 610 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 MANEAQ5SRI9 462 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 ETFRF1Q6IPR1 90 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 PLEKHA7Q6IQ23 1121 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 ZNF549Q6P9A3 640 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 NHLRC1Q6VVB1 395 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 C11orf57Q6ZUT1 292 aaPredicted RBP4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 SPATA21Q7Z572 469 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 ADCK1Q86TW2 530 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 NOXA1Q86UR1 476 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 TRIM74Q86UV6 250 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 TRIM73Q86UV7 250 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 DDIASQ8IXT1 998 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 SLC35F3Q8IY50 421 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 FAM47BQ8NA70 645 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 CNNM3Q8NE01 707 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 DBF4BQ8NFT6 615 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 SYAP1Q96A49 352 aaPredicted RBP4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 MIB2Q96AX9 1013 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 ZC3HAV1LQ96H79 300 aaKnown RBP4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 HES6Q96HZ4 224 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 EGLN2Q96KS0 407 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 GAL3ST4Q96RP7 486 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 HIPK3Q9H422 1215 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 SLC28A3Q9HAS3 691 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 WDR6Q9NNW5 1121 aaKnown RBP4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 SPAG4Q9NPE6 437 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 DNAJC17Q9NVM6 304 aaKnown RBP4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 TSPYL4Q9UJ04 414 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 CPSF3Q9UKF6 684 aaKnown RBP4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 DUSP12Q9UNI6 340 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 TRIM17Q9Y577 477 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 CLIC4Q9Y696 253 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 AP1M2Q9Y6Q5 423 aa4.56□□□□□ -1.68
RAB3IP-214ENST00000550847 A0A1W2PPM1 405 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 TYW5A2RUC4 315 aaKnown RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 CXorf65A6NEN9 183 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 SLC9B1P1A6NJY1 282 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 H3BQ06 376 aaPredicted RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 MPHOSPH10O00566 681 aaKnown RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 ATP2A1O14983 1001 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 SMAD9O15198 467 aaKnown RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 MSI1O43347 362 aaKnown RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 ZWINTO95229 277 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 MMP2P08253 660 aa4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 VIMP08670 466 aaKnown RBP4.55□□□□□ -1.68
RAB3IP-214ENST00000550847 ETFAP13804 333 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms