RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 IL36RNQ9UBH0 155 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 SOGA1O94964 1423 aa5.63□□□□□ -1.51
HCFC2-204ENST00000550335 TARBP1Q13395 1621 aaKnown RBP5.63□□□□□ -1.51
HCFC2-204ENST00000550335 IGLV5-39A0A0G2JS06 123 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 FAM90A26D6RGX4 464 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 KCNN4O15554 427 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 GOSR1O95249 250 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 PRF1P14222 555 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 C21orf33P30042 268 aaPredicted RBP5.62□□□□□ -1.51
HCFC2-204ENST00000550335 TCF7P36402 384 aaPredicted RBP5.62□□□□□ -1.51
HCFC2-204ENST00000550335 ACVRL1P37023 503 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 CLDN20P56880 219 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 COG7P83436 770 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 PDE1BQ01064 536 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 UBXN1Q04323 297 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 COASYQ13057 564 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 TUBB2AQ13885 445 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 RABEP1Q15276 862 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 DECR1Q16698 335 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 KLHL26Q53HC5 615 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 PPP6R3Q5H9R7 873 aaPredicted RBP5.62□□□□□ -1.51
HCFC2-204ENST00000550335 MTX3Q5HYI7 312 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 C11orf57Q6ZUT1 292 aaPredicted RBP5.62□□□□□ -1.51
HCFC2-204ENST00000550335 ZNF534Q76KX8 674 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 OTOAQ7RTW8 1153 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 HOOK3Q86VS8 718 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 TUSC5Q8IXB3 177 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 OR2AJ1Q8NGZ0 328 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 C16orf52Q8NHV5 167 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.62□□□□□ -1.51
HCFC2-204ENST00000550335 ROBO4Q8WZ75 1007 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 MR1Q95460 341 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 SPDL1Q96EA4 605 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 URB1-AS1Q96HZ7 61 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 SEPHS2Q99611 448 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 SYT17Q9BSW7 474 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 MMTAG2Q9BU76 263 aaKnown RBP5.62□□□□□ -1.51
HCFC2-204ENST00000550335 TUBB2BQ9BVA1 445 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 FOXP1Q9H334 677 aaPredicted RBP5.62□□□□□ -1.51
HCFC2-204ENST00000550335 PRMT7Q9NVM4 692 aaPredicted RBP5.62□□□□□ -1.51
HCFC2-204ENST00000550335 TRMT1Q9NXH9 659 aaKnown RBP5.62□□□□□ -1.51
HCFC2-204ENST00000550335 MCM9Q9NXL9 1143 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 DPP3Q9NY33 737 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 RNF150Q9ULK6 438 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 PTGDR2Q9Y5Y4 395 aa5.62□□□□□ -1.51
HCFC2-204ENST00000550335 ANKUB1A6NFN9 424 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 PI4K2BG5E9Z4 385 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 DNM1LO00429 736 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 WNT9BO14905 357 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 FMO6PO60774 539 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 EEF1B2P24534 225 aaKnown RBP5.61□□□□□ -1.51
HCFC2-204ENST00000550335 CUX1P39880 1505 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 HNF4AP41235 474 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 MTHFRP42898 656 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 MXI1P50539 228 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 CDK3Q00526 305 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 NHLH1Q02575 133 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 RCN2Q14257 317 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 AMZ1Q400G9 498 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 CCDC92Q53HC0 331 aaPredicted RBP5.61□□□□□ -1.51
HCFC2-204ENST00000550335 SLC10A5Q5PT55 438 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 ZNF626Q68DY1 528 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 FGD5Q6ZNL6 1462 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 COLCA1Q6ZS62 124 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 MEPCEQ7L2J0 689 aaKnown RBP5.61□□□□□ -1.51
HCFC2-204ENST00000550335 GGNQ86UU5 652 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 NRROSQ86YC3 692 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 FAM219AQ8IW50 185 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 MAP7D3Q8IWC1 876 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 PM20D2Q8IYS1 436 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 SYCP3Q8IZU3 236 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 MOSPD2Q8NHP6 518 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 PPP4R1Q8TF05 950 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 GRK7Q8WTQ7 553 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 WASF1Q92558 559 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 EXT2Q93063 718 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 SPSB1Q96BD6 273 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 SFXN2Q96NB2 322 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 EGFL8Q99944 293 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 GTPBP2Q9BX10 602 aaKnown RBP5.61□□□□□ -1.51
HCFC2-204ENST00000550335 PCED1AQ9H1Q7 454 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.61□□□□□ -1.51
HCFC2-204ENST00000550335 CPSF3Q9UKF6 684 aaKnown RBP5.61□□□□□ -1.51
HCFC2-204ENST00000550335 ZNF608Q9ULD9 1512 aaPredicted RBP5.61□□□□□ -1.51
HCFC2-204ENST00000550335 PADI3Q9ULW8 664 aa5.61□□□□□ -1.51
HCFC2-204ENST00000550335 WDR33Q9C0J8 1336 aaKnown RBP5.6□□□□□ -1.51
HCFC2-204ENST00000550335 A0A1W2PPM1 405 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 HTR3EA5X5Y0 456 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 STX6O43752 255 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 RBMXL2O75526 392 aaKnown RBP5.6□□□□□ -1.51
HCFC2-204ENST00000550335 FGBP02675 491 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 LCATP04180 440 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 SUPT20HL2P0C7V6 817 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 UGT1A1P22309 533 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 LMO1P25800 156 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 SSTR2P30874 369 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 HNRNPKP61978 463 aaKnown RBP eCLIP5.6□□□□□ -1.51
HCFC2-204ENST00000550335 GPS2Q13227 327 aa5.6□□□□□ -1.51
HCFC2-204ENST00000550335 SMU1Q2TAY7 513 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms