RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 RANBP10Q6VN20 620 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 PRSS42Q7Z5A4 293 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 C11orf96Q7Z7L8 435 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 UBL4BQ8N7F7 174 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 RASGEF1AQ8N9B8 481 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 ACTL9Q8TC94 416 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 JPH3Q8WXH2 748 aaPredicted RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 UBXN4Q92575 508 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 KRT35Q92764 455 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 ULK4Q96C45 1275 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 DCUN1D1Q96GG9 259 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 SEMA4CQ9C0C4 833 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZNF768Q9H5H4 540 aaKnown RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 GPN2Q9H9Y4 310 aaPredicted RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 GEMIN8Q9NWZ8 242 aaKnown RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 TUBD1Q9UJT1 453 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 KALRNO60229 2985 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 MACROD2A1Z1Q3 448 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 MGAT4DA6NG13 374 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 MIF4GDA9UHW6 222 aaKnown RBP10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 CFAP99D6REC4 459 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 PJA2O43164 708 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 UGT1A9O60656 530 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 RASSF9O75901 435 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 PRAMEF1O95521 474 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 AGTP01019 485 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 MT-ND3P03897 115 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 LIFP15018 202 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 BRAFP15056 766 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 TYRP1P17643 537 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 UGT1A6P19224 532 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 UGT1A1P22309 533 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 UGT1A4P22310 534 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 AKT1P31749 480 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 ADRA1AP35348 466 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 CCR10P46092 362 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 MARCKSL1P49006 195 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 DRG2P55039 364 aaKnown RBP10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 OTUD4Q01804 1114 aaKnown RBP10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 FOXM1Q08050 763 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 SRSF6Q13247 344 aaKnown RBP10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 GPR18Q14330 331 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 CLCA4Q14CN2 919 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 KHDC1Q4VXA5 237 aaKnown RBP10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 ANKRD20A2Q5SQ80 823 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 ANKRD20A1Q5TYW2 823 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 ANKRD20A3Q5VUR7 823 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 METRNLQ641Q3 311 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 KMT5CQ86Y97 462 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 CARFQ8N187 725 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 EXD3Q8N9H8 876 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 KLHL6Q8WZ60 621 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 PMEPA1Q969W9 287 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 LINC00615Q96LM1 132 aaPredicted RBP10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 SPATA13Q96N96 652 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 TGM7Q96PF1 710 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 FCRL4Q96PJ5 515 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 CTRCQ99895 268 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 CCM2Q9BSQ5 444 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 FICDQ9BVA6 458 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 ASB8Q9H765 288 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 UGT1A7Q9HAW7 530 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 UGT1A10Q9HAW8 530 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 UGT1A8Q9HAW9 530 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 ARNT2Q9HBZ2 717 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 PDE7BQ9NP56 450 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 STARD5Q9NSY2 213 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 OGFRQ9NZT2 677 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 AMFRQ9UKV5 643 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 SLC30A1Q9Y6M5 507 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 COLEC10Q9Y6Z7 277 aa10.67□□□□□ -0.7
VTI1BP3-201ENST00000550220 C17orf113A0A1B0GUU1 675 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 SOWAHDA6NJG2 315 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 OR52A4PA6NMU1 304 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 KCNN4O15554 427 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 PSMD3O43242 534 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 SRP72O76094 671 aaKnown RBP10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 DLGAP3O95886 979 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 RECKO95980 971 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 CCNYL3P0C7X3 344 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 FGF5P12034 268 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 NDUFS1P28331 727 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 VAV2P52735 878 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 ACY1Q03154 408 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 KIF5AQ12840 1032 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 NFATC3Q12968 1075 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 RPE65Q16518 533 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 PARP6Q2NL67 630 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 GPR33Q49SQ1 333 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 BCL7AQ4VC05 210 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 FAM182AQ5T1J6 154 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 CACHD1Q5VU97 1274 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZNF449Q6P9G9 518 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 C6orf15Q6UXA7 325 aaPredicted RBP10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 PEX26Q7Z412 305 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 KIAA1328Q86T90 577 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 OR4K2Q8NGD2 314 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 OR2L2Q8NH16 312 aa10.66□□□□□ -0.7
VTI1BP3-201ENST00000550220 CD180Q99467 661 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms