RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ITGB2P05107 769 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 DRG2P55039 364 aaKnown RBP13.23□□□□□ -0.29
NUP188-211ENST00000550219 MRPS25P82663 173 aaKnown RBP13.23□□□□□ -0.29
NUP188-211ENST00000550219 GPS1Q13098 491 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 KCTD19Q17RG1 926 aaPredicted RBP13.23□□□□□ -0.29
NUP188-211ENST00000550219 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.23□□□□□ -0.29
NUP188-211ENST00000550219 ANKS6Q68DC2 871 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 DUPD1Q68J44 220 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 KCTD11Q693B1 232 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 C8orf74Q6P047 294 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 KDELC1Q6UW63 502 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 NLRP8Q86W28 1048 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 PHYKPLQ8IUZ5 450 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 NCSTNQ92542 709 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 CTRCQ99895 268 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 DPYSL5Q9BPU6 564 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 OR2AG1Q9H205 316 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 FAM153AQ9UHL3 310 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 CNOT6Q9ULM6 557 aaKnown RBP13.23□□□□□ -0.29
NUP188-211ENST00000550219 KALRNO60229 2985 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 UNC13CQ8NB66 2214 aa13.23□□□□□ -0.29
NUP188-211ENST00000550219 EFCAB8A8MWE9 144 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.22□□□□□ -0.29
NUP188-211ENST00000550219 PSMD3O43242 534 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 GRID2O43424 1007 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 RAD1O60671 282 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 ANXA9O76027 345 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 MT-CYBP00156 380 aaPredicted RBP13.22□□□□□ -0.29
NUP188-211ENST00000550219 EPOP01588 193 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 SLC2A4P14672 509 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 LIFP15018 202 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 ZNF8P17098 575 aaPredicted RBP13.22□□□□□ -0.29
NUP188-211ENST00000550219 ADRA1AP35348 466 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 UGT1A3P35503 534 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 MPP3Q13368 585 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 PRPSAP1Q14558 356 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 SEPT7Q16181 437 aaKnown RBP13.22□□□□□ -0.29
NUP188-211ENST00000550219 TBR1Q16650 682 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 INSCQ1MX18 579 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 DCAF12Q5T6F0 453 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 SLC9B2Q86UD5 537 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 CACNA2D3Q8IZS8 1091 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 SPATA22Q8NHS9 363 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 NKD1Q969G9 470 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 LRRC45Q96CN5 670 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 RNF31Q96EP0 1072 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 DDA1Q9BW61 102 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 TBC1D10AQ9BXI6 508 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 GPR63Q9BZJ6 419 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 ZFYVE1Q9HBF4 777 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 SARS2Q9NP81 518 aaKnown RBP13.22□□□□□ -0.29
NUP188-211ENST00000550219 EIF2B3Q9NR50 452 aaKnown RBP13.22□□□□□ -0.29
NUP188-211ENST00000550219 RAB6BQ9NRW1 208 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 ATXN10Q9UBB4 475 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 ASIC3Q9UHC3 531 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 AAR2Q9Y312 384 aaKnown RBP13.22□□□□□ -0.29
NUP188-211ENST00000550219 ZNF711Q9Y462 761 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 PCDHGA3Q9Y5H0 932 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 ATMQ13315 3056 aa13.22□□□□□ -0.29
NUP188-211ENST00000550219 LOC285095A0A1B0GVY8 99 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 ERI2A8K979 691 aaKnown RBP13.21□□□□□ -0.29
NUP188-211ENST00000550219 TP73O15350 636 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 MTX2O75431 263 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 SUN1O94901 812 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 SLC25A14O95258 325 aaPredicted RBP13.21□□□□□ -0.29
NUP188-211ENST00000550219 AP2A1O95782 977 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 F3P13726 295 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 RPL21P46778 160 aaKnown RBP13.21□□□□□ -0.29
NUP188-211ENST00000550219 VPS41P49754 854 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 GEMP55040 296 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 RAB15P59190 212 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 CDK16Q00536 496 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 SLC7A5Q01650 507 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 RNASEH2BQ5TBB1 312 aaKnown RBP13.21□□□□□ -0.29
NUP188-211ENST00000550219 IYDQ6PHW0 289 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 RAVER1Q8IY67 606 aaKnown RBP13.21□□□□□ -0.29
NUP188-211ENST00000550219 GPR26Q8NDV2 337 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 CPT1BQ92523 772 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 MRGPRX2Q96LB1 330 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 TRIB3Q96RU7 358 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 B3GNT4Q9C0J1 378 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 RMI1Q9H9A7 625 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 PRDM8Q9NQV8 689 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 KLC4Q9NSK0 619 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 DMGDHQ9UI17 866 aaKnown RBP13.21□□□□□ -0.29
NUP188-211ENST00000550219 DNAJC16Q9Y2G8 782 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 UTP11Q9Y3A2 253 aaKnown RBP13.21□□□□□ -0.29
NUP188-211ENST00000550219 ZNF462Q96JM2 2506 aa13.21□□□□□ -0.29
NUP188-211ENST00000550219 SDK2Q58EX2 2172 aa13.21□□□□□ -0.3
NUP188-211ENST00000550219 ZFC3H1O60293 1989 aaKnown RBP13.2□□□□□ -0.3
NUP188-211ENST00000550219 RGSL1A5PLK6 1076 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 A6NCN8 305 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 PDZK1P1A8MUH7 402 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 B4E171 279 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 F5H423 210 aaPredicted RBP13.2□□□□□ -0.3
NUP188-211ENST00000550219 DNALI1O14645 258 aaPredicted RBP13.2□□□□□ -0.3
NUP188-211ENST00000550219 NUAK1O60285 661 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 SEC31AO94979 1220 aaKnown RBP13.2□□□□□ -0.3
NUP188-211ENST00000550219 TPSB2P20231 275 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms