RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 CHCHD6Q9BRQ6 235 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 YTHDF1Q9BYJ9 559 aaKnown RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 TOR3AQ9H497 397 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 TFB2MQ9H5Q4 396 aaKnown RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 TBCCD1Q9NVR7 557 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 CEPT1Q9Y6K0 416 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 C7orf72A4D263 438 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 NME4O00746 187 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 GABRDO14764 452 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 NBNO60934 754 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 CDK14O94921 469 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 TBX18O95935 607 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 IFNA14P01570 189 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 MYCLP1P12525 358 aaPredicted RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 LAPTM4AQ15012 233 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 CMTR2Q8IYT2 770 aaKnown RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 LIX1Q8N485 282 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 GPR156Q8NFN8 814 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 OTUB1Q96FW1 271 aaPredicted RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 MFSD1Q9H3U5 465 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 H2AFY2Q9P0M6 372 aaPredicted RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 TMEM9Q9P0T7 183 aa10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 SAMD4AQ9UPU9 718 aaKnown RBP10.11□□□□□ -0.79
SMARCC2-209ENST00000550164 ARAP2Q8WZ64 1704 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 CENPXA8MT69 81 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 HNRNPCL2B2RXH8 293 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 LOC110117498-PIK3R3F6TDL0 507 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 CYP2A7P20853 494 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 CD68P34810 354 aaPredicted RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 PBX3P40426 434 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ALDH9A1P49189 494 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 GPR15P49685 360 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ALDH6A1Q02252 535 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 GTF2H2Q13888 395 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 PHKG1Q16816 387 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 PABPC1LQ4VXU2 614 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 GTF2H2CQ6P1K8 395 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 CASP12Q6UXS9 341 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 LINGO4Q6UY18 593 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 GATAD2AQ86YP4 633 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 RBM12BQ8IXT5 1001 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 PHF21AQ96BD5 680 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 BIRC8Q96P09 236 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 NUSAP1Q9BXS6 441 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 RPF2Q9H7B2 306 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 CRTAC1Q9NQ79 661 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 MIEF1Q9NQG6 463 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 GDAP2Q9NXN4 497 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 PCDHB8Q9UN66 801 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 IGKV6-21A0A0C4DH24 114 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 PRSS51A0A1B0GVH4 220 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 FBP2O00757 339 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 CYP7B1O75881 506 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 SCELO95171 688 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 SLC25A14O95258 325 aaPredicted RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ALDH2P05091 517 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 SPATA31D3P0C874 917 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ARSAP15289 507 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 PCSK6P29122 969 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ALDH3A2P51648 485 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 NPTX1Q15818 432 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ZNF789Q5FWF6 425 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 C6orf183Q5T699 404 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 NANOGP8Q6NSW7 305 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 SPATA31D4Q6ZUB0 917 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 TTC29Q8NA56 475 aaPredicted RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 OR52J3Q8NH60 311 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 CDKN2AIPNLQ96HQ2 116 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 OSBPL2Q9H1P3 480 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 KAT8Q9H7Z6 458 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 NANOGQ9H9S0 305 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 CNOT11Q9UKZ1 510 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 GIT1Q9Y2X7 761 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 PCDHB7Q9Y5E2 793 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 RAI2Q9Y5P3 530 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 CROCCQ5TZA2 2017 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 FAM220BPB1ANY3 271 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ABCB7O75027 752 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 S100A1P23297 94 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 AZGP1P25311 298 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 GPC1P35052 558 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ADAM17P78536 824 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 PFKPQ01813 784 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 TUSC3Q13454 348 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 SKIV2LQ15477 1246 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 RBM48Q5RL73 367 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 TRIQKQ629K1 86 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 NCCRP1Q6ZVX7 275 aaPredicted RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 KRT73Q86Y46 540 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ANKFN1Q8N957 763 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 STON2Q8WXE9 905 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 NELL1Q92832 810 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ACBD6Q9BR61 282 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 MAF1Q9H063 256 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 MEAF6Q9HAF1 191 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 DYRK4Q9NR20 520 aa10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 COL22A1Q8NFW1 1626 aaPredicted RBP10.1□□□□□ -0.79
SMARCC2-209ENST00000550164 ARL5CA6NH57 179 aa10.09□□□□□ -0.79
SMARCC2-209ENST00000550164 IQCF5A8MTL0 148 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms