RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ZNF460Q14592 562 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 CCDC153Q494R4 210 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 PAQR3Q6TCH7 311 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 LRRTM4Q86VH4 590 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 IQCHQ86VS3 1027 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 TRAPPC5Q8IUR0 188 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 SIDT2Q8NBJ9 832 aaKnown RBP17.13■□□□□ 0.33
LETMD1-220ENST00000549686 ASZ1Q8WWH4 475 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 BMFQ96LC9 184 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 LGR4Q9BXB1 951 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 C1QTNF1Q9BXJ1 281 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 DERL2Q9GZP9 239 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 SARS2Q9NP81 518 aaKnown RBP17.13■□□□□ 0.33
LETMD1-220ENST00000549686 PLLPQ9Y342 182 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 LRRK1Q38SD2 2015 aa17.13■□□□□ 0.33
LETMD1-220ENST00000549686 POM121BA6NF01 834 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 OR2AG2A6NM03 316 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 IQCF5A8MTL0 148 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 RBP1P09455 135 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 CCDC166P0CW27 439 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 AOAHP28039 575 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 CNR2P34972 360 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 FNTBP49356 437 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 THOP1P52888 689 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 CTSCP53634 463 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 ACAP2Q15057 778 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 ZNF528Q3MIS6 628 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 WDR45BQ5MNZ6 344 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 ZNF648Q5T619 568 aaPredicted RBP17.12■□□□□ 0.33
LETMD1-220ENST00000549686 DOK6Q6PKX4 331 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 NEK10Q6ZWH5 1172 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 LPCAT2Q7L5N7 544 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 CENPLQ8N0S6 344 aaPredicted RBP17.12■□□□□ 0.33
LETMD1-220ENST00000549686 FRMD1Q8N878 549 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 LKAAEAR1Q8TD35 194 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 TCP10LQ8TDR4 215 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 SNX19Q92543 992 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 ELMO1Q92556 727 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 SCARF2Q96GP6 870 aaPredicted RBP17.12■□□□□ 0.33
LETMD1-220ENST00000549686 WDR92Q96MX6 357 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 MYOCQ99972 504 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 ORAI3Q9BRQ5 295 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 EBF2Q9HAK2 575 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 RUVBL2Q9Y230 463 aaKnown RBP17.12■□□□□ 0.33
LETMD1-220ENST00000549686 TMEM98Q9Y2Y6 226 aa17.12■□□□□ 0.33
LETMD1-220ENST00000549686 NUMA1Q14980 2115 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 LIN7AO14910 233 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-220ENST00000549686 KMOO15229 486 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 GRID2O43424 1007 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 LILRB5O75023 590 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 VCLP18206 1134 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 ITGB6P18564 788 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 CCR7P32248 378 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 RPA3P35244 121 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-220ENST00000549686 MAPK9P45984 424 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 CLDN2P57739 230 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 RACK1P63244 317 aaKnown RBP17.11■□□□□ 0.33
LETMD1-220ENST00000549686 IRF9Q00978 393 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 DMWDQ09019 674 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 CSHL1Q14406 222 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 GBX1Q14549 363 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 SYTL3Q4VX76 610 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 TSSK4Q6SA08 328 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 TMEM207Q6UWW9 146 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 MAML2Q8IZL2 1156 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-220ENST00000549686 OXR1Q8N573 874 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 OR56A4Q8NGH8 313 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 OR2L2Q8NH16 312 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 GIMAP7Q8NHV1 300 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 HM13Q8TCT9 377 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 KCTD4Q8WVF5 259 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 GAB3Q8WWW8 586 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 DNASE2BQ8WZ79 361 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 FAM136AQ96C01 138 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 LINGO1Q96FE5 620 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
LETMD1-220ENST00000549686 TFB2MQ9H5Q4 396 aaKnown RBP17.11■□□□□ 0.33
LETMD1-220ENST00000549686 IGSF5Q9NSI5 407 aa17.11■□□□□ 0.33
LETMD1-220ENST00000549686 MGAT4DA6NG13 374 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 DNAJC6O75061 913 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 POP7O75817 140 aaKnown RBP17.1■□□□□ 0.33
LETMD1-220ENST00000549686 CEACAM5P06731 702 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 MPC1LP0DKB6 136 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 CD1DP15813 335 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 AVPR2P30518 371 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 NUBP1P53384 320 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 RPA4Q13156 261 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 TUBB8Q3ZCM7 444 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 N4BP2L1Q5TBK1 243 aaPredicted RBP17.1■□□□□ 0.33
LETMD1-220ENST00000549686 Q6ZSR6 202 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 CDHR3Q6ZTQ4 885 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 GALNT13Q8IUC8 556 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 CPNE9Q8IYJ1 553 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 MYO1HQ8N1T3 1032 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 PLD6Q8N2A8 252 aaKnown RBP17.1■□□□□ 0.33
LETMD1-220ENST00000549686 ANKRD42Q8N9B4 389 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 MFSD2AQ8NA29 543 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 RHEBL1Q8TAI7 183 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 RDH11Q8TC12 318 aa17.1■□□□□ 0.33
LETMD1-220ENST00000549686 DENND1AQ8TEH3 1009 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms