RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ESRRBO95718 433 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 S100BP04271 92 aaPredicted RBP18.86■□□□□ 0.61
BRF1-215ENST00000549655 FCARP24071 287 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 PRDX3P30048 256 aaKnown RBP18.86■□□□□ 0.61
BRF1-215ENST00000549655 ETV3P41162 512 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 NUDT2P50583 147 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 DCDC1P59894 354 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 SQLEQ14534 574 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 E2F5Q15329 346 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 CRY1Q16526 586 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 FNDC3BQ53EP0 1204 aaKnown RBP18.86■□□□□ 0.61
BRF1-215ENST00000549655 TANGO2Q6ICL3 276 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 DPPA4Q7L190 304 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 NET1Q7Z628 596 aaPredicted RBP18.86■□□□□ 0.61
BRF1-215ENST00000549655 SYVN1Q86TM6 617 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 DDIASQ8IXT1 998 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 TUBB1Q9H4B7 451 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 AKTIPQ9H8T0 292 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 TRPV4Q9HBA0 871 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 HPS4Q9NQG7 708 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 MSRAQ9UJ68 235 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 ZNF225Q9UK10 706 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 OARD1Q9Y530 152 aa18.86■□□□□ 0.61
BRF1-215ENST00000549655 MYO9BQ13459 2157 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 RFXAPO00287 272 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 LMNAP02545 664 aaKnown RBP18.85■□□□□ 0.61
BRF1-215ENST00000549655 OR56A5P0C7T3 313 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 RALGDSQ12967 914 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 PDGFRLQ15198 375 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 PCBP2Q15366 365 aaKnown RBP eCLIP18.85■□□□□ 0.61
BRF1-215ENST00000549655 ZRSR2Q15696 482 aaKnown RBP18.85■□□□□ 0.61
BRF1-215ENST00000549655 C18orf21Q32NC0 220 aaPredicted RBP18.85■□□□□ 0.61
BRF1-215ENST00000549655 DET1Q7L5Y6 550 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 DCLRE1BQ9H816 532 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 SMOXQ9NWM0 555 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 KLHL42Q9P2K6 505 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 TIMM22Q9Y584 194 aa18.85■□□□□ 0.61
BRF1-215ENST00000549655 TNPO3Q9Y5L0 923 aaKnown RBP18.85■□□□□ 0.61
BRF1-215ENST00000549655 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 H0Y3Z8 333 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 KPNA3O00505 521 aaPredicted RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 GIPC1O14908 333 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 GUCA1CO95843 209 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 HLA-EP13747 358 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 ATP1B2P14415 290 aaPredicted RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 AKT1P31749 480 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 CCR7P32248 378 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 TBL3Q12788 808 aaKnown RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 TRMT5Q32P41 509 aaKnown RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 C6orf163Q5TEZ5 329 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 PARS2Q7L3T8 475 aaKnown RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 ENDOVQ8N8Q3 282 aaKnown RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 KYQ8NBH2 561 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 PDPRQ8NCN5 879 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 RCN3Q96D15 328 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 NSUN3Q9H649 340 aaKnown RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 FBRSL1Q9HCM7 1045 aaKnown RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 MBD1Q9UIS9 605 aaPredicted RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 SARDHQ9UL12 918 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 BTRCQ9Y297 605 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 LINC00032P0C843 101 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 CBSLP0DN79 551 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 CBSP35520 551 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 MMP12P39900 470 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 PHKG1Q16816 387 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 C1orf146Q5VVC0 180 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 ERAP2Q6P179 960 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 RIPOR1Q6ZS17 1223 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 GPRIN3Q6ZVF9 776 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 SFTPA1Q8IWL2 248 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 HMGCLL1Q8TB92 370 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 DLG3Q92796 817 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 DCUN1D1Q96GG9 259 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 RIOK2Q9BVS4 552 aaKnown RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 SLC28A3Q9HAS3 691 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 ZFP14Q9HCL3 533 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 RAD18Q9NS91 495 aa18.84■□□□□ 0.61
BRF1-215ENST00000549655 PTBP2Q9UKA9 531 aaKnown RBP18.84■□□□□ 0.61
BRF1-215ENST00000549655 C5orf42Q9H799 3197 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 PSMD12O00232 456 aaPredicted RBP18.83■□□□□ 0.61
BRF1-215ENST00000549655 MTX2O75431 263 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 PRNPP04156 253 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 UROSP10746 265 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 FASTKQ14296 549 aaKnown RBP18.83■□□□□ 0.61
BRF1-215ENST00000549655 GRIN2CQ14957 1233 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 EIF4HQ15056 248 aaKnown RBP18.83■□□□□ 0.61
BRF1-215ENST00000549655 HNRNPA1L2Q32P51 320 aaKnown RBP18.83■□□□□ 0.61
BRF1-215ENST00000549655 C9orf64Q5T6V5 341 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 HENMT1Q5T8I9 393 aaKnown RBP18.83■□□□□ 0.61
BRF1-215ENST00000549655 NAIF1Q69YI7 327 aaPredicted RBP18.83■□□□□ 0.61
BRF1-215ENST00000549655 PGM2L1Q6PCE3 622 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 VITQ6UXI7 678 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 GK5Q6ZS86 529 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 DSELQ8IZU8 1212 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 DTX3LQ8TDB6 740 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 ZNF382Q96SR6 550 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 NUSAP1Q9BXS6 441 aaKnown RBP18.83■□□□□ 0.61
BRF1-215ENST00000549655 ITM2BQ9Y287 266 aa18.83■□□□□ 0.61
BRF1-215ENST00000549655 EDDM13A0A1B0GTR0 161 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms