RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ATP13A3Q9H7F0 1226 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF395Q9H8N7 513 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 SPATA6Q9NWH7 488 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 IPO11Q9UI26 975 aaKnown RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 PCDHGB6Q9Y5F9 930 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GOLGA8QA0A0J9YX86 632 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TCRBV9S1A1TA0A576 114 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GOLGA8OA6NCC3 632 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GOLGA8NF8WBI6 632 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TK2O00142 265 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 MUSKO15146 869 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 NGFRP08138 427 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 BMP1P13497 986 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 SLC2A4P14672 509 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 CD1DP15813 335 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 OR1D2P34982 312 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 NRLP54845 237 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TAS2R38P59533 333 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GBE1Q04446 702 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 LAPTM5Q13571 262 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 C15orf59Q2T9L4 293 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TDRD12Q587J7 1177 aaKnown RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 CTSL3PQ5NE16 218 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 KDELC2Q7Z4H8 507 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ADGRD2Q7Z7M1 963 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 NDUFAF2Q8N183 169 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TAB3Q8N5C8 712 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 SPC24Q8NBT2 197 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 OR13H1Q8NG92 308 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 OR52K2Q8NGK3 314 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 FBLIM1Q8WUP2 373 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 NR4A3Q92570 626 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 WNT2BQ93097 391 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF578Q96N58 590 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 MYADMQ96S97 322 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 RBM15Q96T37 977 aaKnown RBP eCLIP4.82□□□□□ -1.641e-6■□□□□ 10.1
SCAF11-212ENST00000549162 LPIN3Q9BQK8 851 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 SMOC1Q9H4F8 434 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 MVB12BQ9H7P6 319 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 POLE3Q9NRF9 147 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 SMYD2Q9NRG4 433 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TRNAU1APQ9NX07 287 aaKnown RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 IL36AQ9UHA7 158 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 PCDHGA2Q9Y5H1 932 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 A0A096LPE4 126 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 A0A1W2PPZ6 126 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 OR5K4A6NMS3 321 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GOLGA8CPA6NN73 597 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 PRR5-ARHGAP8B1AHC4 643 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 AGRPO00253 132 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ANKRD28O15084 1053 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TTI1O43156 1089 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 MRPS14O60783 128 aaKnown RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 NFKB1P19838 968 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 IMPDH1P20839 514 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 DRD4P21917 467 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 NDUFS1P28331 727 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GABRB3P28472 473 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 RBL1P28749 1068 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 HLA-FP30511 346 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 PPARGP37231 505 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 OR1G1P47890 313 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ALDH18A1P54886 795 aaKnown RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ECT2LQ008S8 904 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 MEF2AQ02078 507 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 POLD3Q15054 466 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 PLA2G4EQ3MJ16 856 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 MTX3Q5HYI7 312 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TCERG1LQ5VWI1 586 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 RNLSQ5VYX0 342 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ATPAF2Q8N5M1 289 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TRPC4APQ8TEL6 797 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 EID2BQ96D98 161 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 STAMBPL1Q96FJ0 436 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 HEPHQ9BQS7 1158 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 CRACR2AQ9BSW2 395 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 OR52A5Q9H2C5 316 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ZFYVE1Q9HBF4 777 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 PGPEP1Q9NXJ5 209 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ACSL5Q9ULC5 683 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GUCA1BQ9UMX6 200 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 BTRCQ9Y297 605 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 HIDE1A8MVS5 230 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PER2O15055 1255 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 EDF1O60869 148 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 TMCC1O94876 653 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 FSBPO95073 299 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 HSPA4LO95757 839 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 FAM107AO95990 144 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 POMCP01189 267 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SNRPAP09012 282 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 RBP1P09455 135 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 RECQLP46063 649 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SUMO1P63165 101 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SLC7A5Q01650 507 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PTSQ03393 145 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PDCD2Q16342 344 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 CWF19L1Q69YN2 538 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 EXOC3L1Q86VI1 746 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms