RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 CTAGE4Q8IX94 777 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 SPAG16Q8N0X2 631 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 PCDH20Q8N6Y1 951 aaKnown RBP3.71□□□□□ -1.82
CNOT2-216ENST00000548939 WDR20Q8TBZ3 569 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 LINGO1Q96FE5 620 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 PLEKHA4Q9H4M7 779 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 POLG2Q9UHN1 485 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 NARFQ9UHQ1 456 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 ERVK-11Q9UQG0 969 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 C2CD2Q9Y426 696 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 SLX4Q8IY92 1834 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 INSRP06213 1382 aa3.71□□□□□ -1.82
CNOT2-216ENST00000548939 MYH14Q7Z406 1995 aaKnown RBP3.71□□□□□ -1.82
CNOT2-216ENST00000548939 PTPRCP08575 1304 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 MON2Q7Z3U7 1717 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 GOLGA6L10A0A0M3HER8 536 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 TEX22C9J3V5 150 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 TCERG1O14776 1098 aaKnown RBP3.7□□□□□ -1.82
CNOT2-216ENST00000548939 CIDEAO60543 219 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 TACC1O75410 805 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 FAM106CPP0CH98 169 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 AZU1P20160 251 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 CLK1P49759 484 aaKnown RBP3.7□□□□□ -1.82
CNOT2-216ENST00000548939 GMPSP49915 693 aaPredicted RBP3.7□□□□□ -1.82
CNOT2-216ENST00000548939 FAM53AQ6NSI3 398 aaPredicted RBP3.7□□□□□ -1.82
CNOT2-216ENST00000548939 SPICE1Q8N0Z3 855 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 TRIM58Q8NG06 486 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 ORAI1Q96D31 301 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 ART5Q96L15 291 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 REEP2Q9BRK0 252 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 PHF7Q9BWX1 381 aaPredicted RBP3.7□□□□□ -1.82
CNOT2-216ENST00000548939 HEMGNQ9BXL5 484 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 PDZD7Q9H5P4 517 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 ACSL5Q9ULC5 683 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 HTTP42858 3142 aa3.7□□□□□ -1.82
CNOT2-216ENST00000548939 COL5A3P25940 1745 aaPredicted RBP3.7□□□□□ -1.82
CNOT2-216ENST00000548939 PSMD14O00487 310 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 IRAK2O43187 625 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 ERVK-10P10266 1014 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 IRF1P10914 325 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 GNB3P16520 340 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 CSNK2A1P68400 391 aaPredicted RBP3.69□□□□□ -1.82
CNOT2-216ENST00000548939 FOXM1Q08050 763 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 NAE1Q13564 534 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 SLC12A1Q13621 1099 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 BRD3Q15059 726 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 RNPS1Q15287 305 aaKnown RBP3.69□□□□□ -1.82
CNOT2-216ENST00000548939 WDR45BQ5MNZ6 344 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 HIST2H2BDQ6DRA6 164 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 TMEM81Q6P7N7 255 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 BRAT1Q6PJG6 821 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 SLC46A3Q7Z3Q1 461 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 TRPT1Q86TN4 253 aaKnown RBP3.69□□□□□ -1.82
CNOT2-216ENST00000548939 CSNK2A3Q8NEV1 391 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 SLC38A5Q8WUX1 472 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 DCPSQ96C86 337 aaKnown RBP3.69□□□□□ -1.82
CNOT2-216ENST00000548939 ELP4Q96EB1 424 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 C20orf141Q9NUB4 165 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 MTMR10Q9NXD2 777 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 TAGLN3Q9UI15 199 aa3.69□□□□□ -1.82
CNOT2-216ENST00000548939 SOS1Q07889 1333 aaPredicted RBP3.69□□□□□ -1.82
CNOT2-216ENST00000548939 RTL1A6NKG5 1358 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 PPIP5K2O43314 1243 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 CTSVO60911 334 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 URODP06132 367 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 SP100P23497 879 aaPredicted RBP3.68□□□□□ -1.82
CNOT2-216ENST00000548939 HOXC8P31273 242 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 DSCR10P59022 87 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 IRX6P78412 446 aaPredicted RBP3.68□□□□□ -1.82
CNOT2-216ENST00000548939 TXNDC8Q6A555 127 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 RAD9BQ6WBX8 426 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 RBMS3Q6XE24 437 aaKnown RBP3.68□□□□□ -1.82
CNOT2-216ENST00000548939 NBPF5PQ86XG9 351 aaPredicted RBP3.68□□□□□ -1.82
CNOT2-216ENST00000548939 SUGP1Q8IWZ8 645 aaKnown RBP3.68□□□□□ -1.82
CNOT2-216ENST00000548939 CCDC146Q8IYE0 955 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 OR5R1Q8NH85 324 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 HMGCLL1Q8TB92 370 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 CD99L2Q8TCZ2 262 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 FCAMRQ8WWV6 532 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 ZNF689Q96CS4 500 aaPredicted RBP3.68□□□□□ -1.82
CNOT2-216ENST00000548939 SLC41A2Q96JW4 573 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 LINC00479Q96M42 142 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 FAM110AQ9BQ89 295 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 TKTL2Q9H0I9 626 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 WDR13Q9H1Z4 485 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 TERF2IPQ9NYB0 399 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 ANKRD31Q8N7Z5 1873 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 CACNA1GO43497 2377 aa3.68□□□□□ -1.82
CNOT2-216ENST00000548939 EDC4Q6P2E9 1401 aaKnown RBP3.68□□□□□ -1.82
CNOT2-216ENST00000548939 NRXN2Q9P2S2 1712 aa3.67□□□□□ -1.82
CNOT2-216ENST00000548939 PIEZO1Q92508 2521 aa3.67□□□□□ -1.82
CNOT2-216ENST00000548939 ZCWPW2A0A1B0GU75 182 aa3.67□□□□□ -1.82
CNOT2-216ENST00000548939 SPINT2O43291 252 aa3.67□□□□□ -1.82
CNOT2-216ENST00000548939 ZNF821O75541 412 aaPredicted RBP3.67□□□□□ -1.82
CNOT2-216ENST00000548939 FTCDO95954 541 aa3.67□□□□□ -1.82
CNOT2-216ENST00000548939 EGFP01133 1207 aa3.67□□□□□ -1.82
CNOT2-216ENST00000548939 HSP90AB1P08238 724 aaKnown RBP3.67□□□□□ -1.82
CNOT2-216ENST00000548939 ZNF26P17031 533 aaPredicted RBP3.67□□□□□ -1.82
CNOT2-216ENST00000548939 FASLGP48023 281 aa3.67□□□□□ -1.82
CNOT2-216ENST00000548939 TAS2R38P59533 333 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms