RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 PGDP52209 483 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 RPS15P62841 145 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 DYNLT1P63172 113 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 CDK18Q07002 472 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 PPIDQ08752 370 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 MESDQ14696 234 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 GPR19Q15760 415 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 EIF2S3LQ2VIR3 472 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 PRAMEF17Q5VTA0 474 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 FAM69BQ5VUD6 431 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 CCDC70Q6NSX1 233 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 TMEM220Q6QAJ8 160 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 C11orf96Q7Z7L8 435 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 SLC25A41Q8N5S1 370 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 FATE1Q969F0 183 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 IQCDQ96DY2 449 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 IMP4Q96G21 291 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 MAK16Q9BXY0 300 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 PACSIN1Q9BY11 444 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 CASS4Q9NQ75 786 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 FGF21Q9NSA1 209 aa11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 FARSAQ9Y285 508 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 RP1L1Q8IWN7 2480 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-205ENST00000548277 FLNCQ14315 2725 aa11.71□□□□□ -0.54
TRAFD1-205ENST00000548277 LRRD1A4D1F6 860 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 OR2AG2A6NM03 316 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 GPR89AB7ZAQ6 455 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 ZNF185O15231 689 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 GPR39O43194 453 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 GYPCP04921 128 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 GPR89BP0CG08 455 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 VCLP18206 1134 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 FECHP22830 423 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 COL8A1P27658 744 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 CA5AP35218 305 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 DCDC1P59894 354 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 IFI35P80217 286 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 PDE1BQ01064 536 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 IL10RAQ13651 578 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 LLGL1Q15334 1064 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 RPE65Q16518 533 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 PRR30Q53SZ7 412 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 DNTTIP2Q5QJE6 756 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 LCN10Q6JVE6 187 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 DUS1LQ6P1R4 473 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 FAM83HQ6ZRV2 1179 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 DET1Q7L5Y6 550 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 RFX6Q8HWS3 928 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 TMEM126BQ8IUX1 230 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 APLFQ8IW19 511 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 PLD5Q8N7P1 536 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 FAF2Q96CS3 445 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 PPM1MQ96MI6 270 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 ING2Q9H160 280 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 RAD18Q9NS91 495 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 IMP3Q9NV31 184 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 PCDHGA6Q9Y5G7 932 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 ANKRD12Q6UB98 2062 aa11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 SPENQ96T58 3664 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-205ENST00000548277 GOLGA6L3A6NEY3 463 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 C21orf140B9A014 251 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 APOL1O14791 398 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 SCRG1O75711 98 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 PTGIRP43119 386 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 CTSCP53634 463 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 ACY1Q03154 408 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 MRPL49Q13405 166 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 XRCC4Q13426 336 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 RAPSNQ13702 412 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 NFE2L1Q14494 772 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 PTPRCAPQ14761 206 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 CHRNA6Q15825 494 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 PPP2R5EQ16537 467 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 UGT8Q16880 541 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 AGAP9Q5VTM2 703 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 PDPK2PQ6A1A2 396 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 CYB5D1Q6P9G0 228 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 FAM151BQ6UXP7 276 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 WASH2PQ6VEQ5 465 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 AMZ2Q86W34 360 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 RBM12BQ8IXT5 1001 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 BEND7Q8N7W2 519 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 RASGEF1AQ8N9B8 481 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 GALNT11Q8NCW6 608 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 SSC4DQ8WTU2 575 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 UBXN4Q92575 508 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 RNF25Q96BH1 459 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 SLC41A2Q96JW4 573 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 ZNF514Q96K75 400 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 XPO4Q9C0E2 1151 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 SLC25A51Q9H1U9 297 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 CHST8Q9H2A9 424 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 GLOD4Q9HC38 313 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 WASH6PQ9NQA3 447 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 HRASLS2Q9NWW9 162 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 SOHLH2Q9NX45 425 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 EPHA6Q9UF33 1036 aa11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 MAP4K5Q9Y4K4 846 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms