RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CHN1P15882 459 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 TYK2P29597 1187 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 TRIM23P36406 574 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 MDH1P40925 334 aaKnown RBP17.17■□□□□ 0.34
HDAC7-227ENST00000548080 ARRB1P49407 418 aaPredicted RBP17.17■□□□□ 0.34
HDAC7-227ENST00000548080 CACNG1Q06432 222 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 C1orf61Q13536 156 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 TYSND1Q2T9J0 566 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 ZRANB3Q5FWF4 1079 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 ZNF789Q5FWF6 425 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 AARS2Q5JTZ9 985 aaKnown RBP17.17■□□□□ 0.34
HDAC7-227ENST00000548080 DCP2Q8IU60 420 aaKnown RBP17.17■□□□□ 0.34
HDAC7-227ENST00000548080 HID1Q8IV36 788 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 NRSN1Q8IZ57 195 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 ANKRD42Q8N9B4 389 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 FAM174AQ8TBP5 190 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 SETD7Q8WTS6 366 aaKnown RBP17.17■□□□□ 0.34
HDAC7-227ENST00000548080 OR1E3Q8WZA6 343 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 APOPT1Q96IL0 206 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 WDR92Q96MX6 357 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 SPATA16Q9BXB7 569 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 ERVMER34-1Q9H9K5 563 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 FGF22Q9HCT0 170 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 INTS10Q9NVR2 710 aaKnown RBP17.17■□□□□ 0.34
HDAC7-227ENST00000548080 SLC39A10Q9ULF5 831 aa17.17■□□□□ 0.34
HDAC7-227ENST00000548080 FAM95CA0A1B0GW59 222 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 CACNB4O00305 520 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-227ENST00000548080 COPEO14579 308 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 TM4SF5O14894 197 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 GIPC1O14908 333 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 PFDN6O15212 129 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 GPR39O43194 453 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 PRSS56P0CW18 603 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 JUNDP17535 347 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 SPAM1P38567 509 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 MAGEA12P43365 314 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 ID4P47928 161 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 CDK3Q00526 305 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 DPTQ07507 201 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 ALG11Q2TAA5 492 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 TUBB8Q3ZCM7 444 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 HENMT1Q5T8I9 393 aaKnown RBP17.16■□□□□ 0.34
HDAC7-227ENST00000548080 ZDHHC20Q5W0Z9 365 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 ZNF765Q7L2R6 523 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 NAXDQ8IW45 347 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 PHACTR4Q8IZ21 702 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 ACVR1CQ8NER5 493 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 SAP25Q8TEE9 199 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.16■□□□□ 0.34
HDAC7-227ENST00000548080 FAM96AQ9H5X1 160 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 IL26Q9NPH9 171 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 SNX15Q9NRS6 342 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 PHPT1Q9NRX4 125 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-227ENST00000548080 INTS9Q9NV88 658 aaKnown RBP17.16■□□□□ 0.34
HDAC7-227ENST00000548080 MKS1Q9NXB0 559 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 KLQ9UEF7 1012 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 CORO1CQ9ULV4 474 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-227ENST00000548080 TMEM98Q9Y2Y6 226 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 DCHS1Q96JQ0 3298 aa17.16■□□□□ 0.34
HDAC7-227ENST00000548080 GLYATL1P3A0A0U1RQE8 302 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 GAPDHSO14556 408 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-227ENST00000548080 FFAR2O15552 330 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 NDUFS3O75489 264 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 PIAS2O75928 621 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 SRP72O76094 671 aaKnown RBP17.15■□□□□ 0.34
HDAC7-227ENST00000548080 ZWINTO95229 277 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 CSF2P04141 144 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 MPOP05164 745 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 CELA2BP08218 269 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-227ENST00000548080 MYCLP1P12525 358 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-227ENST00000548080 RPA3P35244 121 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-227ENST00000548080 RXRGP48443 463 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 TTPAP49638 278 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 CDKN1CP49918 316 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-227ENST00000548080 KIAA1024LP59773 190 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 PTK2BQ14289 1009 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 USP10Q14694 798 aaKnown RBP17.15■□□□□ 0.34
HDAC7-227ENST00000548080 ZNF648Q5T619 568 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-227ENST00000548080 FAM151BQ6UXP7 276 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 TAS2R42Q7RTR8 314 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 KANSL1Q7Z3B3 1105 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 PIANPQ8IYJ0 282 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 OXR1Q8N573 874 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 PNPLA1Q8N8W4 532 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 GPATCH11Q8N954 259 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 DENND1AQ8TEH3 1009 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 ELMO2Q96JJ3 720 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 CABS1Q96KC9 395 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 CAPS2Q9BXY5 557 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 TEX101Q9BY14 249 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 CAB39LQ9H9S4 337 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 RAD18Q9NS91 495 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 PCMTD2Q9NV79 361 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 KCTD5Q9NXV2 234 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 DLL3Q9NYJ7 618 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 VPS9D1Q9Y2B5 631 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 OAS3Q9Y6K5 1087 aaKnown RBP17.15■□□□□ 0.34
HDAC7-227ENST00000548080 SPTBN2O15020 2390 aa17.15■□□□□ 0.34
HDAC7-227ENST00000548080 RRP9O43818 475 aaKnown RBP17.14■□□□□ 0.33
HDAC7-227ENST00000548080 DFNA5O60443 496 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms