RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 USP53Q70EK8 1073 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 TMPRSS9Q7Z410 1059 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 OR6P1Q8NGX9 317 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 OR2L2Q8NH16 312 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 SH3KBP1Q96B97 665 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 LINC00615Q96LM1 132 aaPredicted RBP18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 FOXP3Q9BZS1 431 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 STN1Q9H668 368 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 RDH14Q9HBH5 336 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 SYBUQ9NX95 663 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 DKK4Q9UBT3 224 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 AK5Q9Y6K8 562 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 A0A1W2PNU3 283 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 AVILO75366 819 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 TMEM63AO94886 807 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 CPNE6O95741 557 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 MPOP05164 745 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 PRLHRP49683 370 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 PRAMEP78395 509 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 CLCA4Q14CN2 919 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 PPP1R7Q15435 360 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 METRNLQ641Q3 311 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 PIM3Q86V86 326 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 CAND1Q86VP6 1230 aaKnown RBP18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 AVL9Q8NBF6 648 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 OR4L1Q8NH43 312 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 TMEM74Q96NL1 305 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 TREX1Q9NSU2 369 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 PCYOX1Q9UHG3 505 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 ZMIZ1Q9ULJ6 1067 aa18.38■□□□□ 0.53
PRPF40B-206ENST00000547764 KLHL33A6NCF5 533 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 OR52A4PA6NMU1 304 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 TMX2-CTNND1H3BSU7 103 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 TAF4O00268 1085 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 VIPP01282 170 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 NMBRP28336 390 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 CCKBRP32239 447 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 PTGIRP43119 386 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 INHBCP55103 352 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 ZFP36L1Q07352 338 aaKnown RBP18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 SQSTM1Q13501 440 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 ITIH4Q14624 930 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 CLPPQ16740 277 aaPredicted RBP18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 MAP9Q49MG5 647 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 XKR5Q6UX68 686 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 SLITRK4Q8IW52 837 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 TRIM48Q8IWZ4 208 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 CLDN19Q8N6F1 224 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 MCUQ8NE86 351 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 SLCO2A1Q92959 643 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 SGSM3Q96HU1 749 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 NUDT22Q9BRQ3 303 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 KIFC1Q9BW19 673 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 SEMA6CQ9H3T2 930 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 POLR1BQ9H9Y6 1135 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 FAM8A1Q9UBU6 413 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 PSMD13Q9UNM6 376 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 SATB2Q9UPW6 733 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 KIF26BQ2KJY2 2108 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 EPG5Q9HCE0 2579 aa18.37■□□□□ 0.53
PRPF40B-206ENST00000547764 PRAMEF33A0A0G2JMD5 474 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 GOLGA8MH3BSY2 632 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 BRINP1O60477 761 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 MLNP12872 115 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 HALP42357 657 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 NSG1P42857 185 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 PAFAH1B1P43034 410 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 LSSP48449 732 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 ETF1P62495 437 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 GABREP78334 506 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 GPLD1P80108 840 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 CFHR1Q03591 330 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 FASTKD1Q53R41 847 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 C3orf38Q5JPI3 329 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 LYPLAL1Q5VWZ2 237 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 CES3Q6UWW8 571 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 ZNF574Q6ZN55 896 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 PROSER1Q86XN7 944 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 KLHL7Q8IXQ5 586 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 CFAP206Q8IYR0 622 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 LILRA3Q8N6C8 439 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 NAT8LQ8N9F0 302 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 OR10G6Q8NH81 332 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 CXorf40BQ96DE9 158 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 LIN37Q96GY3 246 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 AHCYL2Q96HN2 611 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 STRADBQ9C0K7 418 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 MRM3Q9HC36 420 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 EPB41L5Q9HCM4 733 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 RNF14Q9UBS8 474 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 ACSL5Q9ULC5 683 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 SOX13Q9UN79 622 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 PRSS21Q9Y6M0 314 aa18.36■□□□□ 0.53
PRPF40B-206ENST00000547764 APC2O95996 2303 aa18.35■□□□□ 0.53
PRPF40B-206ENST00000547764 CCDC187A0A096LP49 1063 aa18.35■□□□□ 0.53
PRPF40B-206ENST00000547764 C17orf113A0A1B0GUU1 675 aa18.35■□□□□ 0.53
PRPF40B-206ENST00000547764 PMS2P1A4D2B8 440 aa18.35■□□□□ 0.53
PRPF40B-206ENST00000547764 AP2A2O94973 939 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms