RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 NUSAP1Q9BXS6 441 aaKnown RBP13.25□□□□□ -0.29
PTCH1-215ENST00000547672 UNKQ9C0B0 810 aaKnown RBP13.25□□□□□ -0.29
PTCH1-215ENST00000547672 LRMDAQ9H2I8 198 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 MMADHCQ9H3L0 296 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-215ENST00000547672 GSTO2Q9H4Y5 243 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 TAGLN3Q9UI15 199 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 ZDHHC2Q9UIJ5 367 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 NUMBLQ9Y6R0 609 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 SCN8AQ9UQD0 1980 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 NPEPPSL1A6NEC2 478 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 NEMP2A6NFY4 417 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 SPECC1L-ADORA2AF8WAN1 911 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 VEGFDO43915 354 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 NUAK1O60285 661 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 GPC4O75487 556 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 CHRNGP07510 517 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 ANXA5P08758 320 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 PCSK2P16519 638 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 CYP2A7P20853 494 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 IGFBP4P22692 258 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 MPSTP25325 297 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 EEF1DP29692 281 aaKnown RBP13.24□□□□□ -0.29
PTCH1-215ENST00000547672 LTBRP36941 435 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 GPR1P46091 355 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 HNMTP50135 292 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 MRPS21P82921 87 aaKnown RBP13.24□□□□□ -0.29
PTCH1-215ENST00000547672 FBXO43Q4G163 708 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 ZNF366Q8N895 744 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 PNPLA1Q8N8W4 532 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 OR2T3Q8NH03 318 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 MCOLN3Q8TDD5 553 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 ARRDC3Q96B67 414 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 FAM136AQ96C01 138 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 FOPNLQ96NB1 174 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 CCM2Q9BSQ5 444 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 NMUR2Q9GZQ4 415 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 MTG2Q9H4K7 406 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 ARHGEF3Q9NR81 526 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 SARDHQ9UL12 918 aa13.24□□□□□ -0.29
PTCH1-215ENST00000547672 MKI67P46013 3256 aaKnown RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 IQCF5A8MTL0 148 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 CAPN14A8MX76 684 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 GPR89AB7ZAQ6 455 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 HGSO14964 777 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 AZIN1O14977 448 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 FFAR2O15552 330 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 GRID2O43424 1007 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 KATNA1O75449 491 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 RPS17P08708 135 aaKnown RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 GPR89BP0CG08 455 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 THRAP10827 490 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 NQO1P15559 274 aaKnown RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 KCNA5P22460 613 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 TEAD1P28347 426 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 PSMD8P48556 350 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 INHBCP55103 352 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 AP1S2P56377 157 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 NCALDP61601 193 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 SEMG2Q02383 582 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 DLX2Q07687 328 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 TMEM115Q12893 351 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 GRIN2CQ14957 1233 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 CST6Q15828 149 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 DNAL1Q4LDG9 190 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 ACSBG2Q5FVE4 666 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 PRPF38BQ5VTL8 546 aaKnown RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 EGFLAMQ63HQ2 1017 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 ASRGL1Q7L266 308 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 ALYREFQ86V81 257 aaKnown RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 TMPRSS6Q8IU80 811 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 CPSF7Q8N684 471 aaKnown RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 PDPRQ8NCN5 879 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 GIMAP7Q8NHV1 300 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 ZNF483Q8TF39 744 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-215ENST00000547672 ATL1Q8WXF7 558 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 SCAMP4Q969E2 229 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 TMEM159Q96B96 161 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 SLC30A3Q99726 388 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 BTBD10Q9BSF8 475 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 HGH1Q9BTY7 390 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 CCDC106Q9BWC9 280 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 SLC12A9Q9BXP2 914 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 C1orf21Q9H246 121 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 PRO3102Q9H379 93 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 MEAF6Q9HAF1 191 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 PARVBQ9HBI1 364 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 TRIM39Q9HCM9 518 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 MID1IP1Q9NPA3 183 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 ZDHHC4Q9NPG8 344 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 NDE1Q9NXR1 346 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 CACNA2D2Q9NY47 1150 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 GALPQ9UBC7 116 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 CD84Q9UIB8 345 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 GPR34Q9UPC5 381 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 NCKAP1Q9Y2A7 1128 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 ANGPTL3Q9Y5C1 460 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 FADS3Q9Y5Q0 445 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 DNMT3AQ9Y6K1 912 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms