RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 TBC1D3HP0C7X1 549 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 SLC35E2BP0CK96 405 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 CSRP1P21291 193 aaKnown RBP17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 ARNTP27540 789 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 GABRB3P28472 473 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 GRIA4P48058 902 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 ZNF235Q14590 738 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 CFAP157Q5JU67 520 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 AGAP9Q5VTM2 703 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TBC1D3GQ6DHY5 549 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TBC1D3CQ6IPX1 549 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 PSAPL1Q6NUJ1 521 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 EPGNQ6UW88 154 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TRIM69Q86WT6 500 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 ZNF354CQ86Y25 554 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TBC1D3Q8IZP1 549 aaPredicted RBP17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 ENDOVQ8N8Q3 282 aaKnown RBP17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 BRSK1Q8TDC3 778 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 AGAP11Q8TF27 550 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 CMTM5Q96DZ9 223 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 IFT43Q96FT9 208 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 HEPHQ9BQS7 1158 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 HDAC8Q9BY41 377 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 MRPL46Q9H2W6 279 aaKnown RBP17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 LHX3Q9UBR4 397 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 SNX11Q9Y5W9 270 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 GOLGA8QA0A0J9YX86 632 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 GOLGA8OA6NCC3 632 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 TARM1B6A8C7 271 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 F8W8V4 182 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 GOLGA8NF8WBI6 632 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 ZNF195O14628 629 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 KITP10721 976 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 SLC1A2P43004 574 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 CTSKP43235 329 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 IDH3AP50213 366 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 RACK1P63244 317 aaKnown RBP17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 NSUN2Q08J23 767 aaKnown RBP eCLIP17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 TUBB3Q13509 450 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 CYTH1Q15438 398 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 HLA-BQ31612 363 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 C6orf163Q5TEZ5 329 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 LRRC8EQ6NSJ5 796 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 KLC3Q6P597 504 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 PARS2Q7L3T8 475 aaKnown RBP17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 TMEM151AQ8N4L1 468 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 DEFB124Q8NES8 71 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 OR2AP1Q8NGE2 309 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 FAR2Q96K12 515 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 ZDHHC5Q9C0B5 715 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 ZDHHC6Q9H6R6 413 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 CAB39LQ9H9S4 337 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 RNPEPL1Q9HAU8 725 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 POPDC3Q9HBV1 291 aa17.09■□□□□ 0.33
RBFOX1-207ENST00000547338 B2RBV5 119 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 ADRB1P08588 477 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 PSMA3P25788 255 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 ITGB7P26010 798 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 MAT2AP31153 395 aaKnown RBP17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 GCKP35557 465 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 NOVA1P51513 510 aaKnown RBP17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 SEPT6Q14141 434 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 RCN2Q14257 317 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 ZNF470Q6ECI4 717 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 ERN2Q76MJ5 926 aaKnown RBP17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 PIWIL4Q7Z3Z4 852 aaKnown RBP17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 ATXN7L3BQ96GX2 97 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 ELMO2Q96JJ3 720 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 SCYL1Q96KG9 808 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 CNDP1Q96KN2 507 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 PSKH2Q96QS6 385 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 MGME1Q9BQP7 344 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 CCDC28BQ9BUN5 200 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 GATA5Q9BWX5 397 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 GAREM1Q9H706 876 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 ZNF395Q9H8N7 513 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 PREBQ9HCU5 417 aa17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 ZFR2Q9UPR6 939 aaKnown RBP17.08■□□□□ 0.32
RBFOX1-207ENST00000547338 TPRP12270 2363 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 ACACBO00763 2458 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 CCDC189A1A4V9 331 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 VILLO15195 856 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 INSIG1O15503 277 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 LYPLA1O75608 230 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 NDST3O95803 873 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 ATXN1LP0C7T5 689 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 ATP5F1P24539 256 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 RECQLP46063 649 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 RPL14P50914 215 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 ATXN3P54252 364 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 DSC2Q02487 901 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 GALNT1Q10472 559 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 CTBP1Q13363 440 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 ACAP2Q15057 778 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 ZRSR2Q15696 482 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 PCSK7Q16549 785 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 MYLK3Q32MK0 819 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 INO80DQ53TQ3 878 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 RALGPS1Q5JS13 557 aa17.07■□□□□ 0.32
RBFOX1-207ENST00000547338 SIRPB2Q5JXA9 342 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms