RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 RCC2Q9P258 522 aaKnown RBP3.72□□□□□ -1.81
CCDC38-204ENST00000546816 RASAL2Q9UJF2 1139 aa3.72□□□□□ -1.81
CCDC38-204ENST00000546816 R3HDM2Q9Y2K5 976 aaKnown RBP3.72□□□□□ -1.81
CCDC38-204ENST00000546816 A0A1B0GVC2 190 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 FAM237BA0A1B0GVD1 139 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 C15orf62A8K5M9 175 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 J3QR06 171 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 PLOD2O00469 737 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 CLIC2O15247 247 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 BSGP35613 385 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 CSRP3P50461 194 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 KRTAP10-8P60410 259 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 IRX6P78412 446 aaPredicted RBP3.71□□□□□ -1.82
CCDC38-204ENST00000546816 NIPAL4Q0D2K0 466 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 MVPQ14764 893 aaKnown RBP3.71□□□□□ -1.82
CCDC38-204ENST00000546816 NAB2Q15742 525 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 CCDC190Q86UF4 302 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 ARHGAP12Q8IWW6 846 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 DIS3L2Q8IYB7 885 aaKnown RBP3.71□□□□□ -1.82
CCDC38-204ENST00000546816 OR2T12Q8NG77 320 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 PPP4R1Q8TF05 950 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 SMPDL3BQ92485 455 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 ZNF689Q96CS4 500 aaPredicted RBP3.71□□□□□ -1.82
CCDC38-204ENST00000546816 POM121L2Q96KW2 1035 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 LINC00479Q96M42 142 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 OPRPNQ99935 248 aaPredicted RBP3.71□□□□□ -1.82
CCDC38-204ENST00000546816 JMJD4Q9H9V9 463 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 MBNL1Q9NR56 388 aaKnown RBP3.71□□□□□ -1.82
CCDC38-204ENST00000546816 ZDHHC18Q9NUE0 388 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 TRMT1Q9NXH9 659 aaKnown RBP3.71□□□□□ -1.82
CCDC38-204ENST00000546816 MRPS28Q9Y2Q9 187 aaKnown RBP3.71□□□□□ -1.82
CCDC38-204ENST00000546816 KCNE2Q9Y6J6 123 aa3.71□□□□□ -1.82
CCDC38-204ENST00000546816 A0A1W2PNU3 283 aaPredicted RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 H3BQ06 376 aaPredicted RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 TCERG1O14776 1098 aaKnown RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 SMAD9O15198 467 aaKnown RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 NDUFS3O75489 264 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 PLA2G4BP0C869 781 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 ITGA3P26006 1051 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 TUBB2AQ13885 445 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 TBCEQ15813 527 aaPredicted RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 FFAR4Q5NUL3 377 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 GLDNQ6ZMI3 551 aaPredicted RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 SH2D5Q6ZV89 423 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 ZNF534Q76KX8 674 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 HJURPQ8NCD3 748 aaPredicted RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 ETNPPLQ8TBG4 499 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 MORC4Q8TE76 937 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 TRPC4APQ8TEL6 797 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 ZKSCAN4Q969J2 545 aaPredicted RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 TUBB2BQ9BVA1 445 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 SEMA6AQ9H2E6 1030 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 ZNF71Q9NQZ8 489 aaPredicted RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 INTS10Q9NVR2 710 aaKnown RBP3.7□□□□□ -1.82
CCDC38-204ENST00000546816 TSPYL4Q9UJ04 414 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 STK36Q9NRP7 1315 aa3.7□□□□□ -1.82
CCDC38-204ENST00000546816 SH2B2O14492 632 aaPredicted RBP3.69□□□□□ -1.82
CCDC38-204ENST00000546816 ARHGEF9O43307 516 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 ZFAND5O76080 213 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 CLPTM1O96005 669 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 CBLP22681 906 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 EPHA2P29317 976 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 THOP1P52888 689 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 ZNF239Q16600 458 aaKnown RBP3.69□□□□□ -1.82
CCDC38-204ENST00000546816 TPRG1Q6ZUI0 275 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 SMC5Q8IY18 1101 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 ZNF843Q8N446 348 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 FRMD1Q8N878 549 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 IL17REQ8NFR9 667 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 GSDMBQ8TAX9 411 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 SLC47A1Q96FL8 570 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 TBATAQ96M53 351 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 RHNO1Q9BSD3 238 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 WDR13Q9H1Z4 485 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 PDCL3Q9H2J4 239 aa3.69□□□□□ -1.82
CCDC38-204ENST00000546816 MEIOCA2RUB1 952 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 TMEM189-UBE2V1I3L0A0 370 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 PLK4O00444 970 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 ZBTB43O43298 467 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 NGFP01138 241 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 HIST1H2ABP04908 130 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 EIF2S1P05198 315 aaKnown RBP3.68□□□□□ -1.82
CCDC38-204ENST00000546816 CLEC3BP05452 202 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 FRMD6-AS1P0C7T7 363 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 ANXA7P20073 488 aaKnown RBP3.68□□□□□ -1.82
CCDC38-204ENST00000546816 HIST1H2ADP20671 130 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 MSH2P43246 934 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 CCR9P51686 369 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 GALCP54803 685 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 MFAP5Q13361 173 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 UBE2V1Q13404 147 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 ADAMTSL4-AS1Q5T5F5 129 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 TMEM198Q66K66 360 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 HIST3H2AQ7L7L0 130 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 PLD3Q8IV08 490 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 RFFLQ8WZ73 363 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 SEMA4DQ92854 862 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 RTP3Q9BQQ7 232 aa3.68□□□□□ -1.82
CCDC38-204ENST00000546816 BARHL2Q9NY43 387 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms