RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 HALP42357 657 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 RPS15P62841 145 aaKnown RBP16.31■□□□□ 0.2
CPSF7-225ENST00000545934 RPE65Q16518 533 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 IZUMO3Q5VZ72 239 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 SLC9A4Q6AI14 798 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 FAM83HQ6ZRV2 1179 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-225ENST00000545934 NT5DC3Q86UY8 548 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 Q8NA96 180 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 SLC38A9Q8NBW4 561 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 BRSK1Q8TDC3 778 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 RAPGEF5Q92565 580 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 ZNF501Q96CX3 271 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-225ENST00000545934 LRFN5Q96NI6 719 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 SRPK1Q96SB4 655 aaKnown RBP16.31■□□□□ 0.2
CPSF7-225ENST00000545934 CEP41Q9BYV8 373 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 ING2Q9H160 280 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 LATS2Q9NRM7 1088 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 FARSAQ9Y285 508 aaKnown RBP16.31■□□□□ 0.2
CPSF7-225ENST00000545934 PCM1Q15154 2024 aa16.31■□□□□ 0.2
CPSF7-225ENST00000545934 PIKFYVEQ9Y2I7 2098 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 OR5K3A6NET4 321 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 TLCD2A6NGC4 264 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 ARGFXA6NJG6 315 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 SMTNL1A8MU46 457 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 CPNE3O75131 537 aaKnown RBP16.3■□□□□ 0.2
CPSF7-225ENST00000545934 NDST3O95803 873 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 SLC4A1P02730 911 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 HMGCLP35914 325 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 PBX1P40424 430 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 HSD11B2P80365 405 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 GPS2Q13227 327 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 PCSK7Q16549 785 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 ALKBH5Q6P6C2 394 aaKnown RBP16.3■□□□□ 0.2
CPSF7-225ENST00000545934 KLHL35Q6PF15 583 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 TRAPPC5Q8IUR0 188 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 ZNF830Q96NB3 372 aaPredicted RBP16.3■□□□□ 0.2
CPSF7-225ENST00000545934 OLFM3Q96PB7 478 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 ACSS2Q9NR19 701 aa16.3■□□□□ 0.2
CPSF7-225ENST00000545934 PRRC2CQ9Y520 2896 aaKnown RBP16.3■□□□□ 0.2
CPSF7-225ENST00000545934 MYO9AB2RTY4 2548 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 C3orf70A6NLC5 250 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-225ENST00000545934 SCRG1O75711 98 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 MT-CYBP00156 380 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-225ENST00000545934 CA5AP35218 305 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 PTGIRP43119 386 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 CCL11P51671 97 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 CTSCP53634 463 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 TUBB4BP68371 445 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 TUBB2AQ13885 445 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 INPP5JQ15735 1006 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-225ENST00000545934 CHRNA6Q15825 494 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 PRR30Q53SZ7 412 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-225ENST00000545934 DNTTIP2Q5QJE6 756 aaKnown RBP16.29■□□□□ 0.2
CPSF7-225ENST00000545934 CRYBG3Q68DQ2 2970 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 JMJD6Q6NYC1 403 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-225ENST00000545934 AMZ2Q86W34 360 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 VSIG1Q86XK7 387 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 CARFQ8N187 725 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 TTC30BQ8N4P2 665 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 RASGEF1AQ8N9B8 481 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 OR8K5Q8NH50 307 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 SPATA22Q8NHS9 363 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 AGAP3Q96P47 875 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 TUBB2BQ9BVA1 445 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 BPIFA1Q9NP55 256 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 IL26Q9NPH9 171 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 UVRAGQ9P2Y5 699 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 ZNF451Q9Y4E5 1061 aa16.29■□□□□ 0.2
CPSF7-225ENST00000545934 DNMT3AQ9Y6K1 912 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-225ENST00000545934 RP1L1Q8IWN7 2480 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-225ENST00000545934 WIPF3A6NGB9 483 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 TCP11X1B4DZS4 312 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 POP7O75817 140 aaKnown RBP16.28■□□□□ 0.2
CPSF7-225ENST00000545934 DDAH2O95865 285 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 ZBED6P86452 979 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 AP1B1Q10567 949 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 GTF2H3Q13889 308 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 GPR19Q15760 415 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 HPS6Q86YV9 775 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 CHST8Q9H2A9 424 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 GLOD4Q9HC38 313 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 KCND1Q9NSA2 647 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 LCMT1Q9UIC8 334 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 PSMD13Q9UNM6 376 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 BTRCQ9Y297 605 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 HEY1Q9Y5J3 304 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 CELSR2Q9HCU4 2923 aa16.28■□□□□ 0.2
CPSF7-225ENST00000545934 LOC285095A0A1B0GVY8 99 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 SSU72P8A0A1W2PR75 194 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 ZBTB11O95625 1053 aaPredicted RBP16.27■□□□□ 0.2
CPSF7-225ENST00000545934 CAPN1P07384 714 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 RAB40ALP0C0E4 278 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 MTHFD1P11586 935 aaKnown RBP16.27■□□□□ 0.2
CPSF7-225ENST00000545934 RORAP35398 523 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 PDE1BQ01064 536 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 NFE2L1Q14494 772 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 IQCB1Q15051 598 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 PLEKHS1Q5SXH7 462 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 METRNLQ641Q3 311 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms