RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 DAPK2Q9UIK4 370 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 FCF1Q9Y324 198 aaKnown RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 A6NCN8 305 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 A8MU76 341 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 BTNL10A8MVZ5 291 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 KCNU1A8MYU2 1149 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 E9PAM4 449 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 FFAR2O15552 330 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TIPRLO75663 272 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TIMP1P01033 207 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 RB1P06400 928 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 BUD31P41223 144 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 SERPINB10P48595 397 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 POLD2P49005 469 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 OGDHQ02218 1023 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 PLGLB1Q02325 96 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TRAF2Q12933 501 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 MBTPS1Q14703 1052 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TEAD2Q15562 447 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TCEAL5Q5H9L2 206 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 RTP2Q5QGT7 225 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 LPCAT4Q643R3 524 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 POMZP3Q6PJE2 187 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ZNF662Q6ZS27 426 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ATP6V1C2Q8NEY4 427 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 LRRC39Q96DD0 335 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 SPATA5L1Q9BVQ7 753 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 KCNN2Q9H2S1 579 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 CCDC134Q9H6E4 229 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ELL3Q9HB65 397 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 CYTH4Q9UIA0 394 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 CD84Q9UIB8 345 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 DNALI1O14645 258 aaPredicted RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 LTA4HP09960 611 aaKnown RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 S100A5P33763 92 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 GNPDA1P46926 289 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 RAD23AP54725 363 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 AUHQ13825 339 aaKnown RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 DPYSL3Q14195 570 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 NR1D2Q14995 579 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 CARTPTQ16568 116 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 KLHDC10Q6PID8 442 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 POTEHQ6S545 545 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 ZNF852Q6ZMS4 543 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 WDTC1Q8N5D0 677 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 TMEM156Q8N614 296 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 PTGR2Q8N8N7 351 aaPredicted RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 PRELID2Q8N945 189 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 LMX1AQ8TE12 382 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 GDPD5Q8WTR4 605 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 IPCEF1Q8WWN9 437 aaPredicted RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 RAD51AP1Q96B01 352 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 LRRC46Q96FV0 321 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 IGSF21Q96ID5 467 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 C12orf66Q96MD2 445 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 NSMCE3Q96MG7 304 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 P2RY13Q9BPV8 354 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 NSUN3Q9H649 340 aaKnown RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 NOL6Q9H6R4 1146 aaKnown RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 LIMD1Q9UGP4 676 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 SLC24A2Q9UI40 661 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 C2CD4BA6NLJ0 364 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 PEX1O43933 1283 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 FAM189A1O60320 539 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 KERAO60938 352 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 TNFP01375 233 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 SOD2P04179 222 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 TFEBP19484 476 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 NT5EP21589 574 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 TCEA1P23193 301 aaKnown RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 ME2P23368 584 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 SSTR1P30872 391 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 PDX1P52945 283 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 MAPK10P53779 464 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 SGCBQ16585 318 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 EGFLAMQ63HQ2 1017 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 RNF43Q68DV7 783 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 MFSD5Q6N075 450 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 CERS6Q6ZMG9 384 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 MRPL10Q7Z7H8 261 aaKnown RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 POU5F2Q8N7G0 328 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 SLC35F5Q8WV83 523 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 FIG4Q92562 907 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 GLOD4Q9HC38 313 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 DMTF1Q9Y222 760 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 TRIOBPQ9H2D6 2365 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 CD3EAPO15446 510 aaKnown RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 DDX3YO15523 660 aaKnown RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 AVPR1BP47901 424 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 MSLNQ13421 630 aaPredicted RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 TRIM40Q6P9F5 258 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 KLHL24Q6TFL4 600 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 CASP12Q6UXS9 341 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 TAC4Q86UU9 113 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 SLC15A3Q8IY34 581 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 WDR36Q8NI36 951 aaKnown RBP8.51□□□□□ -1.05
CLIP1-218ENST00000545889 CKAP2Q8WWK9 683 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 SMPDL3BQ92485 455 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 NSMCE2Q96MF7 247 aa8.51□□□□□ -1.05
CLIP1-218ENST00000545889 NELL2Q99435 816 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms