RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 IL27RAQ6UWB1 636 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 SDCCAG8Q86SQ7 713 aaPredicted RBP16.02■□□□□ 0.16
LIMS2-217ENST00000545738 OXR1Q8N573 874 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 CALML6Q8TD86 181 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 GPBAR1Q8TDU6 330 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 LMX1AQ8TE12 382 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 DCUN1D1Q96GG9 259 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 ATXN7L3BQ96GX2 97 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 TCF12Q99081 682 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 NDNQ99608 321 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 SLC30A3Q99726 388 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 SLC13A1Q9BZW2 595 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 ZCCHC2Q9C0B9 1178 aaKnown RBP16.02■□□□□ 0.16
LIMS2-217ENST00000545738 RMI1Q9H9A7 625 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 INTS10Q9NVR2 710 aaKnown RBP16.02■□□□□ 0.16
LIMS2-217ENST00000545738 DNAAF2Q9NVR5 837 aaKnown RBP16.02■□□□□ 0.16
LIMS2-217ENST00000545738 TRNAU1APQ9NX07 287 aaKnown RBP16.02■□□□□ 0.16
LIMS2-217ENST00000545738 FAM8A1Q9UBU6 413 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 GPR34Q9UPC5 381 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 AQP9O43315 295 aa16.02■□□□□ 0.15
LIMS2-217ENST00000545738 POP7O75817 140 aaKnown RBP16.02■□□□□ 0.15
LIMS2-217ENST00000545738 ZNF7P17097 686 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-217ENST00000545738 RPS3P23396 243 aaKnown RBP eCLIP16.02■□□□□ 0.15
LIMS2-217ENST00000545738 GCAP28676 217 aa16.02■□□□□ 0.15
LIMS2-217ENST00000545738 ARRB1P49407 418 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-217ENST00000545738 ADARP55265 1226 aaKnown RBP16.02■□□□□ 0.15
LIMS2-217ENST00000545738 HNRNPKP61978 463 aaKnown RBP eCLIP16.02■□□□□ 0.15
LIMS2-217ENST00000545738 SLC29A2Q14542 456 aa16.02■□□□□ 0.15
LIMS2-217ENST00000545738 SLC30A9Q6PML9 568 aa16.02■□□□□ 0.15
LIMS2-217ENST00000545738 STRA8Q7Z7C7 330 aa16.02■□□□□ 0.15
LIMS2-217ENST00000545738 LMNTD2Q8IXW0 634 aa16.02■□□□□ 0.15
LIMS2-217ENST00000545738 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.02■□□□□ 0.158e-7■■■■■ 58.5
LIMS2-217ENST00000545738 LINC00615Q96LM1 132 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-217ENST00000545738 ACSS3Q9H6R3 686 aa16.02■□□□□ 0.15
LIMS2-217ENST00000545738 CFAP99D6REC4 459 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 KMOO15229 486 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 YY2O15391 372 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 SPAG6O75602 509 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 SHBGP04278 402 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 RALBP11234 206 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 CCR7P32248 378 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 STX2P32856 288 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 CCT8P50990 548 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 GTF2H3Q13889 308 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 DEFB133Q30KQ1 61 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 ZNF449Q6P9G9 518 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 KIAA0408Q6ZU52 694 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 TRMT10CQ7L0Y3 403 aaKnown RBP16.01■□□□□ 0.15
LIMS2-217ENST00000545738 ZC3HC1Q86WB0 502 aaKnown RBP16.01■□□□□ 0.15
LIMS2-217ENST00000545738 PPM1NQ8N819 430 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 MYRIPQ8NFW9 859 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 GIMAP7Q8NHV1 300 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 PATE1Q8WXA2 126 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 MRRFQ96E11 262 aaKnown RBP16.01■□□□□ 0.15
LIMS2-217ENST00000545738 KLC4Q9NSK0 619 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 SPATS2LQ9NUQ6 558 aaKnown RBP16.01■□□□□ 0.15
LIMS2-217ENST00000545738 TBC1D29Q9UFV1 150 aa16.01■□□□□ 0.15
LIMS2-217ENST00000545738 HMX2A2RU54 273 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 A6NCN8 305 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 C4orf47A7E2U8 309 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 TRIM38O00635 465 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 FFAR2O15552 330 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 AP2A2O94973 939 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 MYF5P13349 255 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 CD59P13987 128 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 BRAFP15056 766 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 BLKP51451 505 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 CDKN2DP55273 166 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 INSCQ1MX18 579 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 AASDHQ4L235 1098 aaPredicted RBP16■□□□□ 0.15
LIMS2-217ENST00000545738 RNF187Q5TA31 235 aaPredicted RBP16■□□□□ 0.15
LIMS2-217ENST00000545738 DBX2Q6ZNG2 339 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 CEP128Q6ZU80 1094 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 GALNT7Q86SF2 657 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 CTAGE3PQ8IX95 158 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 KIAA2013Q8IYS2 634 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 HEXDCQ8WVB3 486 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 CAVIN3Q969G5 261 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 TIMM29Q9BSF4 260 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 SCHIP1Q9P0W5 487 aaPredicted RBP16■□□□□ 0.15
LIMS2-217ENST00000545738 CDYLQ9Y232 598 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 WDR37Q9Y2I8 494 aa16■□□□□ 0.15
LIMS2-217ENST00000545738 PCDHGA12O60330 932 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 ABHD2P08910 425 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 CTSEP14091 401 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 PKMP14618 531 aaKnown RBP15.99■□□□□ 0.15
LIMS2-217ENST00000545738 RPL10P27635 214 aaKnown RBP15.99■□□□□ 0.15
LIMS2-217ENST00000545738 PDHA2P29803 388 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 HSD17B3P37058 310 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 ACTR1BP42025 376 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 ATXN3P54252 364 aaPredicted RBP15.99■□□□□ 0.15
LIMS2-217ENST00000545738 ACTR1AP61163 376 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 ARHGAP8P85298 464 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 BRD3Q15059 726 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 SEPT7Q16181 437 aaKnown RBP15.99■□□□□ 0.15
LIMS2-217ENST00000545738 EMBQ6PCB8 327 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 PIM3Q86V86 326 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 SLC26A11Q86WA9 606 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 VRK3Q8IV63 474 aa15.99■□□□□ 0.15
LIMS2-217ENST00000545738 SPDYE1Q8NFV5 336 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms