RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 RAD21L1Q9H4I0 556 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 POLR1BQ9H9Y6 1135 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 APOBEC3GQ9HC16 384 aaKnown RBP4.29□□□□□ -1.72
SNHG1-224ENST00000545688 SLC38A7Q9NVC3 462 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 PTTG2Q9NZH5 202 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 OGFRQ9NZT2 677 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 FBXW11Q9UKB1 542 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 SRCAPQ6ZRS2 3230 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 ATP10BO94823 1461 aa4.29□□□□□ -1.72
SNHG1-224ENST00000545688 KIAA0556O60303 1618 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 STRCQ7RTU9 1775 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 A6NL46 340 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 H3BQ06 376 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 PLPP2O43688 288 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 IPO7O95373 1038 aaKnown RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 HOXA13P31271 388 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 RGS2P41220 211 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 LUMP51884 338 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 CTSCP53634 463 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 TAS2R40P59535 323 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 CD81P60033 236 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 ZRSR2Q15696 482 aaKnown RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 DUOXA1Q1HG43 343 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 ZFP69Q49AA0 526 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 ASPRV1Q53RT3 343 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 R3HCC1LQ7Z5L2 792 aaKnown RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 C1orf52Q8N6N3 182 aaKnown RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 PDZD7Q9H5P4 517 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 INTS10Q9NVR2 710 aaKnown RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 C2orf42Q9NWW7 574 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 MTMR10Q9NXD2 777 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 B3GALT5Q9Y2C3 310 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 R3HDM2Q9Y2K5 976 aaKnown RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 TMEM184BQ9Y519 407 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 COL2A1P02458 1487 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-224ENST00000545688 ABCA9Q8IUA7 1624 aa4.28□□□□□ -1.72
SNHG1-224ENST00000545688 TTC37Q6PGP7 1564 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 FLT1P17948 1338 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 ARHGEF40Q8TER5 1519 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 A0A1W2PPH5 198 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 MAP2K7O14733 419 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 SLC22A2O15244 555 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 CRLF1O75462 422 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 BMP10O95393 424 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 SPARCP09486 303 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 CLK1P49759 484 aaKnown RBP4.27□□□□□ -1.73
SNHG1-224ENST00000545688 ITGA9Q13797 1035 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 TMEM187Q14656 261 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 ADIPOQQ15848 244 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 LPAL2Q16609 132 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 KIAA1644Q3SXP7 199 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 SOWAHCQ53LP3 525 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-224ENST00000545688 NDUFAF5Q5TEU4 345 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 CYP20A1Q6UW02 462 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 MFSD6Q6ZSS7 791 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 CCDC190Q86UF4 302 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 SMAP1Q8IYB5 467 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-224ENST00000545688 SPEM1Q8N4L4 309 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 WDFY2Q96P53 400 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 SEPT5Q99719 369 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-224ENST00000545688 TMEM39BQ9GZU3 492 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 EPB41L5Q9HCM4 733 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 PREBQ9HCU5 417 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 UBN1Q9NPG3 1134 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 DNAJB4Q9UDY4 337 aa4.27□□□□□ -1.73
SNHG1-224ENST00000545688 SIGLEC1Q9BZZ2 1709 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 ZMYM4Q5VZL5 1548 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 ARHGEF12Q9NZN5 1544 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 ARID4BQ4LE39 1312 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-224ENST00000545688 RIMS1Q86UR5 1692 aaKnown RBP4.26□□□□□ -1.73
SNHG1-224ENST00000545688 DENND4BO75064 1496 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-224ENST00000545688 MAGI2Q86UL8 1455 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 HRH2P25021 359 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 MMP15P51511 669 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 KRTAP10-3P60369 221 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 TMEM95Q3KNT9 176 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 SH2D5Q6ZV89 423 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 RNF168Q8IYW5 571 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-224ENST00000545688 OR8K5Q8NH50 307 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 KCNG4Q8TDN1 519 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 ZNF653Q96CK0 615 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 FGF22Q9HCT0 170 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 SIX2Q9NPC8 291 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 CACNG5Q9UF02 275 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 KCNJ14Q9UNX9 436 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 MRPS28Q9Y2Q9 187 aaKnown RBP4.26□□□□□ -1.73
SNHG1-224ENST00000545688 POGZQ7Z3K3 1410 aa4.26□□□□□ -1.73
SNHG1-224ENST00000545688 FANCAO15360 1455 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 RAPGEF2Q9Y4G8 1499 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 C15orf62A8K5M9 175 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 MAGEB17A8MXT2 336 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 PLOD2O00469 737 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 HCRTR2O43614 444 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 DAB1O75553 588 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 CASP6P55212 293 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 NAB2Q15742 525 aa4.25□□□□□ -1.73
SNHG1-224ENST00000545688 SLC1A5Q15758 541 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms