RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ADAM23O75077 832 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 TCF3P15923 654 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 HALP42357 657 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 ZNF140P52738 457 aaPredicted RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 OXCT1P55809 520 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 MRPS6P82932 125 aaKnown RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 ECT2LQ008S8 904 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 TRIM32Q13049 653 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 MS4A13Q5J8X5 152 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 SLC2A7Q6PXP3 512 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 MRPL10Q7Z7H8 261 aaKnown RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 SPATA2LQ8IUW3 424 aaPredicted RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 GIPC2Q8TF65 315 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 PPP1R13LQ8WUF5 828 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 VMP1Q96GC9 406 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 SH3YL1Q96HL8 342 aaPredicted RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 CDKN2AIPNLQ96HQ2 116 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 RPL10LQ96L21 214 aaKnown RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 MBOAT4Q96T53 435 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 SEMA3CQ99985 751 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 PSD2Q9BQI7 771 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 FUNDC2Q9BWH2 189 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 NMUR1Q9HB89 426 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 TRNAU1APQ9NX07 287 aaKnown RBP8.65□□□□□ -1.02
TDP1-204ENST00000545686 USP22Q9UPT9 525 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 PCDHGB1Q9Y5G3 927 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 V9GYQ6 96 aa8.65□□□□□ -1.02
TDP1-204ENST00000545686 SCN10AQ9Y5Y9 1956 aa8.65□□□□□ -1.03
TDP1-204ENST00000545686 A0A1W2PQH9 124 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 UBA6A0AVT1 1052 aaPredicted RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 NPEPPSL1A6NEC2 478 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 PDHXO00330 501 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 RAMP2O60895 175 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 UGT2B11O75310 529 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 NDST3O95803 873 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 HTR1AP08908 422 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 CCDC159P0C7I6 412 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 IL7RP16871 459 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 AFF1P51825 1210 aaKnown RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 MLLT10P55197 1068 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 TPD52P55327 224 aaPredicted RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 TBX4P57082 545 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 YBEYP58557 167 aaPredicted RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 ITGADQ13349 1161 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 SERINC3Q13530 473 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 RFX4Q33E94 735 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 OVOS1Q6IE37 1185 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 SULT1C3Q6IMI6 304 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 CRTC3Q6UUV7 619 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 LRRTM3Q86VH5 581 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 MON1AQ86VX9 555 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 TMCO5AQ8N6Q1 288 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 ATP6V0D2Q8N8Y2 350 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 OR13C4Q8NGS5 318 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 TAMM41Q96BW9 452 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 CCDC138Q96M89 665 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 PAAF1Q9BRP4 392 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 MAGIXQ9H6Y5 334 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 AKIP1Q9NQ31 210 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 C3orf18Q9UK00 162 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 IKZF3Q9UKT9 509 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 BAG5Q9UL15 447 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 SCML2Q9UQR0 700 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 PCDHGA8Q9Y5G5 932 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 TRPV2Q9Y5S1 764 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 ST14Q9Y5Y6 855 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 CPQQ9Y646 472 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 SCN8AQ9UQD0 1980 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 FAM92AA1XBS5 289 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 CDC7O00311 574 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 BTN3A1O00481 513 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 E2F3O00716 465 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 PFDN6O15212 129 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 SLC22A1O15245 554 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 PRAMEF11O60813 436 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 BCAS1O75363 584 aaPredicted RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 VPS26AO75436 327 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 NDUFS3O75489 264 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 CNTN5O94779 1100 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 GABARAPO95166 117 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 KCNH1O95259 989 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 SERPINF2P08697 491 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 IL1RNP18510 177 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 TYMPP19971 482 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 PRDX3P30048 256 aaKnown RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 IDUAP35475 653 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 OPRL1P41146 370 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 MAGEA10P43363 369 aaPredicted RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 MAPKAPK2P49137 400 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 PGFP49763 221 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 ZNF235Q14590 738 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 SPCS2Q15005 226 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 POLD3Q15054 466 aaPredicted RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 ACOX1Q15067 660 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 SMU1Q2TAY7 513 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 ALFQ53S48 1182 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 ZC3H12BQ5HYM0 836 aaKnown RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 AGMOQ6ZNB7 445 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 NECAB2Q7Z6G3 386 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 PLEKHH3Q7Z736 793 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms