RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 SEPT10Q9P0V9 454 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 VPS18Q9P253 973 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 GULP1Q9UBP9 304 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 SUCOQ9UBS9 1254 aaKnown RBP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 CD84Q9UIB8 345 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 APPL1Q9UKG1 709 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 SUFUQ9UMX1 484 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 ENTPD2Q9Y5L3 495 aa7.62□□□□□ -1.19
SNHG1-223ENST00000545440 EPN1Q9Y6I3 576 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-223ENST00000545440 A0A0U1RQS6 177 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 HACD1B0YJ81 288 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 B4DGG1 531 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 APOC4-APOC2K7ER74 178 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 PJA2O43164 708 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 TLX3O43711 291 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 NUDT21O43809 227 aaKnown RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 DNAJA2O60884 412 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 CLDN7O95471 211 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 NDST3O95803 873 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 APOC2P02655 101 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 MPOP05164 745 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 FAM87AP0C7U9 286 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 PTPN7P35236 360 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 EIF2S3P41091 472 aaKnown RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 GNPDA1P46926 289 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 VAV2P52735 878 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 ERVPABLB-1P60509 514 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 EIF3IQ13347 325 aaKnown RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 HLTFQ14527 1009 aaKnown RBP eCLIP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 NR1D2Q14995 579 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 KAZNQ674X7 775 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 PDPK2PQ6A1A2 396 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 RFLNAQ6ZTI6 216 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 BBS12Q6ZW61 710 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 SPRED1Q7Z699 444 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 CDH24Q86UP0 819 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 C17orf82Q86X59 251 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 TXLNBQ8N3L3 684 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 FAM46DQ8NEK8 389 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 CCL4L1Q8NHW4 92 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 KRT35Q92764 455 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 SCAMP4Q969E2 229 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 LIN37Q96GY3 246 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 TEKT5Q96M29 485 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 ZNF578Q96N58 590 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 RIOK2Q9BVS4 552 aaKnown RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 DPEP2Q9H4A9 486 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 C7orf69Q9H7B7 122 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 GLOD4Q9HC38 313 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 MAGEE1Q9HCI5 957 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 SAE1Q9UBE0 346 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 MOSPD1Q9UJG1 213 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 TFR2Q9UP52 801 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 SATB2Q9UPW6 733 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 REXO2Q9Y3B8 237 aaKnown RBP7.61□□□□□ -1.19
SNHG1-223ENST00000545440 ZNF711Q9Y462 761 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 PCDHGA8Q9Y5G5 932 aa7.61□□□□□ -1.19
SNHG1-223ENST00000545440 CCDC187A0A096LP49 1063 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 A0A1W2PQM1 296 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 CCDC66A2RUB6 948 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 FADS2P1A8MWK0 482 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 GPR89AB7ZAQ6 455 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 TMX2-CTNND1H3BSU7 103 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 RRP8O43159 456 aaKnown RBP7.6□□□□□ -1.19
SNHG1-223ENST00000545440 ZNF189O75820 626 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-223ENST00000545440 MT-CYBP00156 380 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-223ENST00000545440 FUCA1P04066 466 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 RPLP0P05388 317 aaKnown RBP7.6□□□□□ -1.19
SNHG1-223ENST00000545440 GPR89BP0CG08 455 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 CTNNA2P26232 953 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 CCKBRP32239 447 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 ADCY8P40145 1251 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 ABCG1P45844 678 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 CDK18Q07002 472 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 ADCY2Q08462 1091 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 WASHC5Q12768 1159 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 XRCC4Q13426 336 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 NOMO1Q15155 1222 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 CLPPQ16740 277 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-223ENST00000545440 COL28A1Q2UY09 1125 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 PYCR3Q53H96 274 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 C3orf38Q5JPI3 329 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 ZNF569Q5MCW4 686 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 SFRP5Q5T4F7 317 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 DOK6Q6PKX4 331 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 SLC30A9Q6PML9 568 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 RAD9BQ6WBX8 426 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 TRIM74Q86UV6 250 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 ZC3H18Q86VM9 953 aaKnown RBP7.6□□□□□ -1.19
SNHG1-223ENST00000545440 GAS2L3Q86XJ1 694 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 NRROSQ86YC3 692 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 GALNT13Q8IUC8 556 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 TMEM139Q8IV31 216 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 LRRC57Q8N9N7 239 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 HTR3CQ8WXA8 447 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 FGF11Q92914 225 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 ATXN7L3BQ96GX2 97 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 GFM1Q96RP9 751 aaKnown RBP7.6□□□□□ -1.19
SNHG1-223ENST00000545440 WDR24Q96S15 920 aa7.6□□□□□ -1.19
SNHG1-223ENST00000545440 AGAP2Q99490 1192 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms