RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 PKMP14618 531 aaKnown RBP12.88□□□□□ -0.35
DDX11-227ENST00000544652 H2AFXP16104 143 aaPredicted RBP12.88□□□□□ -0.35
DDX11-227ENST00000544652 JUNDP17535 347 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 ENGP17813 658 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 CD9P21926 228 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 TGM1P22735 817 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 GCAP28676 217 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 GNPDA1P46926 289 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 CD151P48509 253 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 CLCNKAP51800 687 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 EIF3BP55884 814 aaKnown RBP12.88□□□□□ -0.35
DDX11-227ENST00000544652 HNRNPKP61978 463 aaKnown RBP eCLIP12.88□□□□□ -0.35
DDX11-227ENST00000544652 DMPKQ09013 629 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 LRP8Q14114 963 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 CCDC6Q16204 474 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 CSRP2Q16527 193 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 HLA-BQ31612 363 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 GRTP1Q5TC63 336 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 XKR5Q6UX68 686 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 DET1Q7L5Y6 550 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 GALNT13Q8IUC8 556 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 HID1Q8IV36 788 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 CTAGE3PQ8IX95 158 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 NAT14Q8WUY8 206 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 SLC44A1Q8WWI5 657 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 TIMM29Q9BSF4 260 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 AARSD1Q9BTE6 412 aaKnown RBP12.88□□□□□ -0.35
DDX11-227ENST00000544652 TCEAL2Q9H3H9 227 aaPredicted RBP12.88□□□□□ -0.35
DDX11-227ENST00000544652 SMOC1Q9H4F8 434 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 CARS2Q9HA77 564 aaKnown RBP12.88□□□□□ -0.35
DDX11-227ENST00000544652 FSCN3Q9NQT6 498 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 DNAJC28Q9NX36 388 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 APOBEC3BQ9UH17 382 aaKnown RBP12.88□□□□□ -0.35
DDX11-227ENST00000544652 ZNHIT2Q9UHR6 403 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 ZNF180Q9UJW8 692 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 MED16Q9Y2X0 877 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 ST14Q9Y5Y6 855 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 PCM1Q15154 2024 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 CACNA1HO95180 2353 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 MGAT4DA6NG13 374 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 YKT6O15498 198 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 POP7O75817 140 aaKnown RBP12.87□□□□□ -0.35
DDX11-227ENST00000544652 PIAS2O75928 621 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 CER1O95813 267 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 FTH1P02794 183 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 FMO4P31512 558 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 LIMK2P53671 638 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 ARHGAP8P85298 464 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 ZNF542PQ5EBM4 170 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 TCEAL6Q6IPX3 200 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 CRTC3Q6UUV7 619 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 KANSL1Q7Z3B3 1105 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 RD3Q7Z3Z2 195 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 TRAPPC5Q8IUR0 188 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 SDR16C5Q8N3Y7 309 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 BEND7Q8N7W2 519 aaPredicted RBP12.87□□□□□ -0.35
DDX11-227ENST00000544652 OR2L2Q8NH16 312 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 UHMK1Q8TAS1 419 aaKnown RBP12.87□□□□□ -0.35
DDX11-227ENST00000544652 GPBAR1Q8TDU6 330 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 DCAKDQ8WVC6 231 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 TCEAL3Q969E4 200 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 VPS39Q96JC1 886 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 PANX3Q96QZ0 392 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 PAFAH2Q99487 392 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 GPR22Q99680 433 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 CCM2Q9BSQ5 444 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 LRRC61Q9BV99 259 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 SLC13A1Q9BZW2 595 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 TMEM168Q9H0V1 697 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 CAAP1Q9H8G2 361 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 PPCSQ9HAB8 311 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 PARD6AQ9NPB6 346 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 TM7SF3Q9NS93 570 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 SEMA4GQ9NTN9 838 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 TXNDC16Q9P2K2 825 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 NCDNQ9UBB6 729 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 SLC23A2Q9UGH3 650 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 MOSPD1Q9UJG1 213 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 PRKAB1Q9Y478 270 aa12.87□□□□□ -0.35
DDX11-227ENST00000544652 EXOC1LA0A1B0GW35 172 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 IQCF5A8MTL0 148 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 NIPSNAP2O75323 286 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 TCEA3O75764 348 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 FAM155BO75949 473 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 SHBGP04278 402 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 ZNF883P0CG24 379 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 EPHA8P29322 1005 aaPredicted RBP12.86□□□□□ -0.35
DDX11-227ENST00000544652 SPRP35270 261 aaPredicted RBP12.86□□□□□ -0.35
DDX11-227ENST00000544652 ARRB1P49407 418 aaPredicted RBP12.86□□□□□ -0.35
DDX11-227ENST00000544652 TIAL1Q01085 375 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDX11-227ENST00000544652 SPEM2Q0P670 501 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 RASA2Q15283 850 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 PRAMEF14Q5SWL7 426 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 RBM20Q5T481 1227 aaKnown RBP12.86□□□□□ -0.35
DDX11-227ENST00000544652 PTRHD1Q6GMV3 140 aaKnown RBP12.86□□□□□ -0.35
DDX11-227ENST00000544652 FAM45BPQ6NSW5 357 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 ADGRD1Q6QNK2 874 aa12.86□□□□□ -0.35
DDX11-227ENST00000544652 CHST15Q7LFX5 561 aaPredicted RBP12.86□□□□□ -0.35
DDX11-227ENST00000544652 AMZ2Q86W34 360 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms