RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PDP1Q9P0J1 537 aaPredicted RBP12.67□□□□□ -0.38
CHD4-211ENST00000544484 PER2O15055 1255 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 UGT2B17O75795 530 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 KRT33AO76009 404 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 TTKP33981 857 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 BNIP1Q12981 228 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 RALGPS1Q5JS13 557 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 UBXN11Q5T124 520 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 SIAH1Q8IUQ4 282 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 ZNF563Q8TA94 476 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 PIH1D2Q8WWB5 315 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 CHRNGP07510 517 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 NCK1P16333 377 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 IDH3AP50213 366 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 PTPN5P54829 565 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 MED27Q6P2C8 311 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 OR2T34Q8NGX1 318 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 OR2T3Q8NH03 318 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 ZCCHC10Q8TBK6 192 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 TLCD1Q96CP7 247 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 CLK4Q9HAZ1 481 aaKnown RBP12.67□□□□□ -0.38
CHD4-211ENST00000544484 SLC7A4O43246 635 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 PIGRP01833 764 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 CDH5P33151 784 aaPredicted RBP12.67□□□□□ -0.38
CHD4-211ENST00000544484 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 NDUFAF6Q330K2 333 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 NCBP2-AS2Q69YL0 99 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 KLHL35Q6PF15 583 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 ZNF366Q8N895 744 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 BANPQ8N9N5 519 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 FAM98AQ8NCA5 519 aaKnown RBP12.67□□□□□ -0.38
CHD4-211ENST00000544484 PSMA8Q8TAA3 256 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 ALG2Q9H553 416 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 CMTM6Q9NX76 183 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 TLR6Q9Y2C9 796 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 ELOVL7A1L3X0 281 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 MAPK12P53778 367 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 DCTN2Q13561 401 aaKnown RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 SH3D19Q5HYK7 790 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 FBXL22Q6P050 247 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 TMEM109Q9BVC6 243 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 CNTN6Q9UQ52 1028 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 BTBD3Q9Y2F9 522 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 SIGLEC1Q9BZZ2 1709 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 FMN2Q9NZ56 1722 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 SNPHO15079 494 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 ALPIP09923 528 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 ZNF24P17028 368 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 PTGER3P43115 390 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 HSPB3Q12988 150 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 TAF1AQ15573 450 aaPredicted RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 TXNDC8Q6A555 127 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.66□□□□□ -0.385e-7■■■■■ 50.8
CHD4-211ENST00000544484 SLC34A3Q8N130 599 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 IPCEF1Q8WWN9 437 aaPredicted RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 KAT2AQ92830 837 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 HAPLN3Q96S86 360 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 MCM8Q9UJA3 840 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 PEAK1Q9H792 1746 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 CCNDBP1O95273 360 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 ESR1P03372 595 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 TPP2P29144 1249 aaPredicted RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 CCND3P30281 292 aaPredicted RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 KLF1Q13351 362 aaPredicted RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 MINDY4Q4G0A6 757 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 C6orf52Q5T4I8 152 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 ZNF248Q8NDW4 579 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 ST13P5Q8NFI4 369 aaPredicted RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 MON2Q7Z3U7 1717 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 IQCMA0A1B0GVH7 501 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 MCIDASD6RGH6 385 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 KCNQ1P51787 676 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 MYBPC1Q00872 1141 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 CYP1B1Q16678 543 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 SLC35B2Q8TB61 432 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 TEFMQ96QE5 360 aaKnown RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 ERVW-1Q9UQF0 538 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 MTX2O75431 263 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 ASMTP46597 345 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 RHAGQ02094 409 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 GAD2Q05329 585 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 ALG11Q2TAA5 492 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 C2orf27AQ580R0 203 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 TDRPQ86YL5 185 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 PLEKHO2Q8TD55 490 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 LCN9Q8WX39 176 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 DNASE1L2Q92874 299 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 J3KR12 359 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 CDH3P22223 829 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 OLIG2Q13516 323 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 LPIN1Q14693 890 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 PGAM4Q8N0Y7 254 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 NIPA2Q8N8Q9 360 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 OR10A6Q8NH74 314 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 RNASE11Q8TAA1 199 aaKnown RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 RELTQ969Z4 430 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 PYCR2Q96C36 320 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 MTERF1Q99551 399 aaKnown RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 EBF4Q9BQW3 602 aa12.66□□□□□ -0.38
CHD4-211ENST00000544484 OR2AG1Q9H205 316 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms