RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 MTX2O75431 263 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 AP2A2O94973 939 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 JUNP05412 331 aaKnown RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 NCF1P14598 390 aaPredicted RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 TSPAN8P19075 237 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 IGFBP4P22692 258 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 AOAHP28039 575 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 P2RY2P41231 377 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 CDH13P55290 713 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 NAA20P61599 178 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 GBX1Q14549 363 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 PPP1R3AQ16821 1122 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 LDLRAP1Q5SW96 308 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 METTL21CQ5VZV1 264 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 ANKS6Q68DC2 871 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 DET1Q7L5Y6 550 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 GLYATL1Q969I3 302 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 SLC7A6OSQ96CW6 309 aaPredicted RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 ERLEC1Q96DZ1 483 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 NSUN5Q96P11 429 aaKnown RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 RSPH9Q9H1X1 276 aaPredicted RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 LNPEPQ9UIQ6 1025 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 TSR3Q9UJK0 312 aaKnown RBP19.54■□□□□ 0.72
COPS7A-218ENST00000543939 COQ6Q9Y2Z9 468 aa19.54■□□□□ 0.72
COPS7A-218ENST00000543939 ATG2BQ96BY7 2078 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 CFAP73A6NFT4 308 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 EIF3FO00303 357 aaPredicted RBP19.53■□□□□ 0.72
COPS7A-218ENST00000543939 SNX2O60749 519 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 HNRNPCL1O60812 293 aaKnown RBP19.53■□□□□ 0.72
COPS7A-218ENST00000543939 RECQL5O94762 991 aaPredicted RBP19.53■□□□□ 0.72
COPS7A-218ENST00000543939 CDK14O94921 469 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 C6P13671 934 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 MSH3P20585 1137 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 MAGEA9P43362 315 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 CNTN1Q12860 1018 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 UBAP2LQ14157 1087 aaKnown RBP19.53■□□□□ 0.72
COPS7A-218ENST00000543939 TBCCQ15814 346 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 PDCD2Q16342 344 aaPredicted RBP19.53■□□□□ 0.72
COPS7A-218ENST00000543939 PIP5KL1Q5T9C9 394 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 AFAP1L2Q8N4X5 818 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 CCDC28BQ9BUN5 200 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 FAM126AQ9BYI3 521 aaPredicted RBP19.53■□□□□ 0.72
COPS7A-218ENST00000543939 LRMDAQ9H2I8 198 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 WDR55Q9H6Y2 383 aaPredicted RBP19.53■□□□□ 0.72
COPS7A-218ENST00000543939 ARHGEF3Q9NR81 526 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 TRAF6Q9Y4K3 522 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 FADS3Q9Y5Q0 445 aa19.53■□□□□ 0.72
COPS7A-218ENST00000543939 TRPC5OSA6NMA1 111 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 MMP20O60882 483 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 ENO3P13929 434 aaPredicted RBP19.52■□□□□ 0.72
COPS7A-218ENST00000543939 CTHP32929 405 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 AGTR2P50052 363 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 SH3BP2P78314 561 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 CLCQ05315 142 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 FRA10AC1Q70Z53 315 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 MICALL1Q8N3F8 863 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 ZNF483Q8TF39 744 aaPredicted RBP19.52■□□□□ 0.72
COPS7A-218ENST00000543939 MAELQ96JY0 434 aaKnown RBP19.52■□□□□ 0.72
COPS7A-218ENST00000543939 UTP6Q9NYH9 597 aaKnown RBP19.52■□□□□ 0.72
COPS7A-218ENST00000543939 ADAMTS6Q9UKP5 1117 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 CDYLQ9Y232 598 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 OARD1Q9Y530 152 aa19.52■□□□□ 0.72
COPS7A-218ENST00000543939 GOLGA8QA0A0J9YX86 632 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 GOLGA8OA6NCC3 632 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 GRXCR2A6NFK2 248 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 PRR5-ARHGAP8B1AHC4 643 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 SPECC1L-ADORA2AF8WAN1 911 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 GOLGA8NF8WBI6 632 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 H3BQ06 376 aaPredicted RBP19.51■□□□□ 0.71
COPS7A-218ENST00000543939 NEMP1O14524 444 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 RAD51BO15315 384 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 SOD1P00441 154 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 FGF4P08620 206 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 AOC1P19801 751 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 CALB2P22676 271 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 EPHA3P29320 983 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 DRD3P35462 400 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 TIE1P35590 1138 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 RASSF2P50749 326 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 ARHGAP8P85298 464 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 SATB1Q01826 763 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 CST6Q15828 149 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 LSM12Q3MHD2 195 aaKnown RBP19.51■□□□□ 0.71
COPS7A-218ENST00000543939 FBXO48Q5FWF7 155 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 ZNF648Q5T619 568 aaPredicted RBP19.51■□□□□ 0.71
COPS7A-218ENST00000543939 ACAD11Q709F0 780 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 KIF2BQ8N4N8 673 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 NUS1Q96E22 293 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 PPP1R36Q96LQ0 422 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 PCTPQ9UKL6 214 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 CNOT6Q9ULM6 557 aaKnown RBP19.51■□□□□ 0.71
COPS7A-218ENST00000543939 E9PBE3 544 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 PPP6CO00743 305 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 SDHDO14521 159 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 FFAR2O15552 330 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 LZTS3O60299 673 aaPredicted RBP19.51■□□□□ 0.71
COPS7A-218ENST00000543939 KLHL41O60662 606 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 NQO1P15559 274 aaKnown RBP19.51■□□□□ 0.71
COPS7A-218ENST00000543939 INHBCP55103 352 aa19.51■□□□□ 0.71
COPS7A-218ENST00000543939 SEC13P55735 322 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms