RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 SLC47A1Q96FL8 570 aa12.4□□□□□ -0.42
SMCR5-201ENST00000543475 C17orf80Q9BSJ5 609 aa12.4□□□□□ -0.42
SMCR5-201ENST00000543475 C16orf70Q9BSU1 422 aa12.4□□□□□ -0.42
SMCR5-201ENST00000543475 NUSAP1Q9BXS6 441 aaKnown RBP12.4□□□□□ -0.42
SMCR5-201ENST00000543475 ALOXE3Q9BYJ1 711 aa12.4□□□□□ -0.42
SMCR5-201ENST00000543475 NOL6Q9H6R4 1146 aaKnown RBP12.4□□□□□ -0.42
SMCR5-201ENST00000543475 CARS2Q9HA77 564 aaKnown RBP12.4□□□□□ -0.42
SMCR5-201ENST00000543475 CPNE5Q9HCH3 593 aa12.4□□□□□ -0.42
SMCR5-201ENST00000543475 ABCB10Q9NRK6 738 aa12.4□□□□□ -0.42
SMCR5-201ENST00000543475 SMPD4Q9NXE4 827 aa12.4□□□□□ -0.42
SMCR5-201ENST00000543475 USE1Q9NZ43 259 aa12.4□□□□□ -0.42
SMCR5-201ENST00000543475 PIN4Q9Y237 131 aaKnown RBP12.4□□□□□ -0.42
SMCR5-201ENST00000543475 NCF1BA6NI72 391 aaPredicted RBP12.39□□□□□ -0.43
SMCR5-201ENST00000543475 NCF1CA8MVU1 366 aaPredicted RBP12.39□□□□□ -0.43
SMCR5-201ENST00000543475 GABRDO14764 452 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 FGF10O15520 208 aaPredicted RBP12.39□□□□□ -0.43
SMCR5-201ENST00000543475 GLP2RO95838 553 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 ANGPTL1O95841 491 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 UROSP10746 265 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 NCF1P14598 390 aaPredicted RBP12.39□□□□□ -0.43
SMCR5-201ENST00000543475 PSMB9P28065 219 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 CD40LGP29965 261 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 CYP2C18P33260 490 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 PPP5CP53041 499 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 NCS1P62166 190 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 TIAL1Q01085 375 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMCR5-201ENST00000543475 RBBP7Q16576 425 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 XKR7Q5GH72 579 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 BHLHA9Q7RTU4 235 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 SYVN1Q86TM6 617 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 APOBEC3FQ8IUX4 373 aaKnown RBP12.39□□□□□ -0.43
SMCR5-201ENST00000543475 FAM126BQ8IXS8 530 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 AADATQ8N5Z0 425 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 DPP10Q8N608 796 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 FRS2Q8WU20 508 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 TBATAQ96M53 351 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 ACTR8Q9H981 624 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 INTS6Q9UL03 887 aaKnown RBP12.39□□□□□ -0.43
SMCR5-201ENST00000543475 ORC6Q9Y5N6 252 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 NOX1Q9Y5S8 564 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 BRCA1P38398 1863 aaKnown RBP12.39□□□□□ -0.43
SMCR5-201ENST00000543475 DNAJC25-GNG10A0A024R161 153 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 MROH6A6NGR9 719 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 UNCXA6NJT0 531 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 KERAO60938 352 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 PAGE1O75459 146 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 GSNP06396 782 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 PTPN2P17706 415 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 MAP2K4P45985 399 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 NKX2-5P52952 324 aaPredicted RBP12.39□□□□□ -0.43
SMCR5-201ENST00000543475 CDK5R2Q13319 367 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 C6orf136Q5SQH8 315 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 CATSPEREQ5SY80 951 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 PRR23BQ6ZRT6 265 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 EID3Q8N140 333 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 ARL10Q8N8L6 244 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 OR2T12Q8NG77 320 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 GIPC2Q8TF65 315 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 SP140LQ9H930 580 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 ERVK-18Q9QC07 812 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 ADGRE2Q9UHX3 823 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 PCDHGB1Q9Y5G3 927 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 PCNTO95613 3336 aa12.39□□□□□ -0.43
SMCR5-201ENST00000543475 TTC34A8MYJ7 566 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 BCKDKO14874 412 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 SNPHO15079 494 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 CD3EAPO15446 510 aaKnown RBP12.38□□□□□ -0.43
SMCR5-201ENST00000543475 ASNA1O43681 348 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 NUAK1O60285 661 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 CNMDO75829 334 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 KCNE1P15382 129 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
SMCR5-201ENST00000543475 ALDH7A1P49419 539 aaKnown RBP12.38□□□□□ -0.43
SMCR5-201ENST00000543475 FPGSQ05932 587 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 CDC20Q12834 499 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 NKG7Q16617 165 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 PLD3Q8IV08 490 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 RHOXF1Q8NHV9 184 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 PPTC7Q8NI37 304 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 KIAA1191Q96A73 305 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 IMP4Q96G21 291 aaKnown RBP12.38□□□□□ -0.43
SMCR5-201ENST00000543475 TXNDC15Q96J42 360 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 SMOC2Q9H3U7 446 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 DSN1Q9H410 356 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 ATP13A1Q9HD20 1204 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 TXNRD2Q9NNW7 524 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 MPP6Q9NZW5 540 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 UTS2RQ9UKP6 389 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 TIMM13Q9Y5L4 95 aaPredicted RBP12.38□□□□□ -0.43
SMCR5-201ENST00000543475 DLGAP3O95886 979 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 HOXB8P17481 243 aaPredicted RBP12.38□□□□□ -0.43
SMCR5-201ENST00000543475 RYKP34925 604 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 ST13P50502 369 aaKnown RBP12.38□□□□□ -0.43
SMCR5-201ENST00000543475 VGLL4Q14135 290 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 NPTX1Q15818 432 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 MRNIPQ6NTE8 343 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 ATP6V0D2Q8N8Y2 350 aa12.38□□□□□ -0.43
SMCR5-201ENST00000543475 Q8N9G6 341 aaPredicted RBP12.38□□□□□ -0.43
SMCR5-201ENST00000543475 YIPF6Q96EC8 236 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms