RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 KLHL8Q9P2G9 620 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 TMPRSS11EQ9UL52 423 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 WDR37Q9Y2I8 494 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 PKP3Q9Y446 797 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 COL12A1Q99715 3063 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 NBASA2RRP1 2371 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 GLYATL1P3A0A0U1RQE8 302 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 LOC285095A0A1B0GVY8 99 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 C21orf140B9A014 251 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 CREG1O75629 220 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 RECKO95980 971 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 EPOP01588 193 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 NFKB1P19838 968 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 ACY1Q03154 408 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 DMPKQ09013 629 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 ITGA9Q13797 1035 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 SIRPB2Q5JXA9 342 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 MFSD7Q6UXD7 560 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 FAM151BQ6UXP7 276 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 GLT6D1Q7Z4J2 308 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 BPHLQ86WA6 291 aaPredicted RBP17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 ATCAYQ86WG3 371 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 BLOC1S5Q8TDH9 187 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 FCRL4Q96PJ5 515 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 LHX9Q9NQ69 397 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 SPTLC3Q9NUV7 552 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 SAE1Q9UBE0 346 aaPredicted RBP17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 PSMD13Q9UNM6 376 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 MAN2B2Q9Y2E5 1009 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 PCDHGA6Q9Y5G7 932 aa17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 DNMT3AQ9Y6K1 912 aaPredicted RBP17.06■□□□□ 0.32
PPP1CA-210ENST00000542876 FLNCQ14315 2725 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 UBA6A0AVT1 1052 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 UGT1A9O60656 530 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 CST8O60676 142 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 UGT1A6P19224 532 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 UGT1A1P22309 533 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 UGT1A4P22310 534 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 PDE1BQ01064 536 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 XRCC4Q13426 336 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 NOMO1Q15155 1222 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 CHRNA6Q15825 494 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 RPE65Q16518 533 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 LONRF2Q1L5Z9 754 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 DNTTIP2Q5QJE6 756 aaKnown RBP17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 KAZNQ674X7 775 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 TMEM220Q6QAJ8 160 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 ASB18Q6ZVZ8 466 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 PID1Q7Z2X4 250 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 KMT5CQ86Y97 462 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 RASGEF1AQ8N9B8 481 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 DDHD1Q8NEL9 900 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 P3H4Q92791 437 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 SLC41A2Q96JW4 573 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 ZNF514Q96K75 400 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 CD180Q99467 661 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 VAT1Q99536 393 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 NHEJ1Q9H9Q4 299 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 UGT1A7Q9HAW7 530 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 UGT1A10Q9HAW8 530 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 UGT1A8Q9HAW9 530 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 ABHD10Q9NUJ1 306 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 IMP3Q9NV31 184 aaKnown RBP17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 IL17CQ9P0M4 197 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 LRRK2Q5S007 2527 aa17.05■□□□□ 0.32
PPP1CA-210ENST00000542876 IGHV5-51A0A0C4DH38 117 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 OR2AG2A6NM03 316 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 FURINP09958 794 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 HLA-DPA1P20036 260 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 NR1D1P20393 614 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 MSH3P20585 1137 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 COMTP21964 271 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 AKT1P31749 480 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 CD68P34810 354 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 CDKN2BP42772 138 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 PMS2P54278 862 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 WASHC5Q12768 1159 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 GPRC6AQ5T6X5 926 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 PWWP2BQ6NUJ5 590 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 ARMC6Q6NXE6 501 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 KDELC1Q6UW63 502 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 TTC30BQ8N4P2 665 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 BEND7Q8N7W2 519 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 IPMKQ8NFU5 416 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 GPR150Q8NGU9 434 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 CT55Q8WUE5 264 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 FCRL5Q96RD9 977 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 CHP1Q99653 195 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 FSD1LQ9BXM9 530 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 GPR87Q9BY21 358 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 ACTL8Q9H568 366 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 FGF21Q9NSA1 209 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 SEMA5BQ9P283 1151 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 TLK1Q9UKI8 766 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 PLAAQ9Y263 795 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 HYOU1Q9Y4L1 999 aa17.04■□□□□ 0.32
PPP1CA-210ENST00000542876 TLCD2A6NGC4 264 aa17.03■□□□□ 0.32
PPP1CA-210ENST00000542876 F5H423 210 aaPredicted RBP17.03■□□□□ 0.32
PPP1CA-210ENST00000542876 STX7O15400 261 aaKnown RBP17.03■□□□□ 0.32
PPP1CA-210ENST00000542876 TIAF1O95411 115 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms