RNA–Protein interactions for RNA: ENST00000542145.5

RAP1B-228, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-228ENST00000542145 NUP85Q9BW27 656 aa17.51■□□□□ 0.39
RAP1B-228ENST00000542145 NLNQ9BYT8 704 aa17.51■□□□□ 0.39
RAP1B-228ENST00000542145 MYO1AQ9UBC5 1043 aa17.51■□□□□ 0.39
RAP1B-228ENST00000542145 AMACRQ9UHK6 382 aa17.51■□□□□ 0.39
RAP1B-228ENST00000542145 TMPRSS11EQ9UL52 423 aa17.51■□□□□ 0.39
RAP1B-228ENST00000542145 SHOC2Q9UQ13 582 aa17.51■□□□□ 0.39
RAP1B-228ENST00000542145 MEN1O00255 615 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 VEGFDO43915 354 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 CAPN1P07384 714 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 CD48P09326 243 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 CCNCP24863 283 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 HNRNPH3P31942 346 aaKnown RBP17.5■□□□□ 0.39
RAP1B-228ENST00000542145 DCDC1P59894 354 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 GALNT3Q14435 633 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 DNTTIP2Q5QJE6 756 aaKnown RBP17.5■□□□□ 0.39
RAP1B-228ENST00000542145 TIGD7Q6NT04 549 aaPredicted RBP17.5■□□□□ 0.39
RAP1B-228ENST00000542145 DSELQ8IZU8 1212 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 TTC30BQ8N4P2 665 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 TEKT4Q8WW24 435 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 MARVELD3Q96A59 401 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 LRFN5Q96NI6 719 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 TSGA13Q96PP4 275 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 C5AR2Q9P296 337 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 LIMA1Q9UHB6 759 aaKnown RBP17.5■□□□□ 0.39
RAP1B-228ENST00000542145 DOCK10Q96BY6 2186 aa17.5■□□□□ 0.39
RAP1B-228ENST00000542145 CNTRLQ7Z7A1 2325 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 UBA6A0AVT1 1052 aaPredicted RBP17.49■□□□□ 0.39
RAP1B-228ENST00000542145 TLCD2A6NGC4 264 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 PIRTP0C851 137 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 GZMAP12544 262 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 CD86P42081 329 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 GSDMDP57764 484 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 CDK18Q07002 472 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 ATP1A4Q13733 1029 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 ELOAQ14241 798 aaKnown RBP17.49■□□□□ 0.39
RAP1B-228ENST00000542145 RPE65Q16518 533 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 IFI16Q16666 785 aaKnown RBP17.49■□□□□ 0.39
RAP1B-228ENST00000542145 CRB2Q5IJ48 1285 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 CCDC122Q5T0U0 273 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 NCBP2-AS2Q69YL0 99 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 PDPK2PQ6A1A2 396 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 KLHL35Q6PF15 583 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 TMC3Q7Z5M5 1100 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 FATE1Q969F0 183 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 NFKBIL1Q9UBC1 381 aaPredicted RBP17.49■□□□□ 0.39
RAP1B-228ENST00000542145 B3GNT3Q9Y2A9 372 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 SCINQ9Y6U3 715 aa17.49■□□□□ 0.39
RAP1B-228ENST00000542145 PDZD2O15018 2839 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 ARHGAP10A1A4S6 786 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 F5H423 210 aaPredicted RBP17.48■□□□□ 0.39
RAP1B-228ENST00000542145 DDX3YO15523 660 aaKnown RBP17.48■□□□□ 0.39
RAP1B-228ENST00000542145 HALP42357 657 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 RRADP55042 308 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 SLC25A11Q02978 314 aaKnown RBP17.48■□□□□ 0.39
RAP1B-228ENST00000542145 KRT81Q14533 505 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 PAFAH1B3Q15102 231 aaKnown RBP17.48■□□□□ 0.39
RAP1B-228ENST00000542145 FAM182AQ5T1J6 154 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 FBXO38Q6PIJ6 1188 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 ZNF571Q7Z3V5 609 aaPredicted RBP17.48■□□□□ 0.39
RAP1B-228ENST00000542145 TRAPPC5Q8IUR0 188 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 OR8K5Q8NH50 307 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 CPT1BQ92523 772 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 INPP5DQ92835 1189 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 PPM1MQ96MI6 270 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 CD180Q99467 661 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 BARD1Q99728 777 aaKnown RBP17.48■□□□□ 0.39
RAP1B-228ENST00000542145 ADGRE3Q9BY15 652 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 HAUS4Q9H6D7 363 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 MRPL47Q9HD33 250 aaKnown RBP17.48■□□□□ 0.39
RAP1B-228ENST00000542145 LATS2Q9NRM7 1088 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 HRASLS2Q9NWW9 162 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 PSMD13Q9UNM6 376 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 NTNG1Q9Y2I2 539 aa17.48■□□□□ 0.39
RAP1B-228ENST00000542145 OR5K3A6NET4 321 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 LRRC10BA6NIK2 292 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 DDX3XO00571 662 aaKnown RBP eCLIP17.47■□□□□ 0.399e-28■■□□□ 12
RAP1B-228ENST00000542145 HNRNPRO43390 633 aaKnown RBP17.47■□□□□ 0.39
RAP1B-228ENST00000542145 LCA5LO95447 670 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 ZBTB11O95625 1053 aaPredicted RBP17.47■□□□□ 0.39
RAP1B-228ENST00000542145 SLC4A1P02730 911 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 BPIP17213 487 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 VCLP18206 1134 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 GRNP28799 593 aaKnown RBP17.47■□□□□ 0.39
RAP1B-228ENST00000542145 CA5AP35218 305 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 RORAP35398 523 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 TMEM115Q12893 351 aaPredicted RBP17.47■□□□□ 0.39
RAP1B-228ENST00000542145 PLCL1Q15111 1095 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 KYNUQ16719 465 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 VWA5B1Q5TIE3 1220 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 FAM198BQ6UWH4 519 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 FAM71BQ8TC56 605 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 CLIP3Q96DZ5 547 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 MOCOSQ96EN8 888 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 SGSM3Q96HU1 749 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 BTBD6Q96KE9 485 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 TRIB3Q96RU7 358 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 UNKQ9C0B0 810 aaKnown RBP17.47■□□□□ 0.39
RAP1B-228ENST00000542145 NUP62CLQ9H1M0 184 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 RAD18Q9NS91 495 aa17.47■□□□□ 0.39
RAP1B-228ENST00000542145 HAUS2Q9NVX0 235 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms