RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 NENFQ9UMX5 172 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 PPIEQ9UNP9 301 aaKnown RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 LRP12Q9Y561 859 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 MAU2Q9Y6X3 613 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 V9GYY5 206 aaPredicted RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 NPC1L1Q9UHC9 1359 aa3.21□□□□□ -1.9
USP28-210ENST00000542033 BAZ1BQ9UIG0 1483 aaKnown RBP3.21□□□□□ -1.9
USP28-210ENST00000542033 hCG_1809904A0A1W2PP81 198 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 A0A1W2PPE2 198 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 A0A1W2PR64 198 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 OR2A25A4D2G3 310 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 GOLGA6L19H0YKK7 550 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 PDLIM1O00151 329 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 VCYO14598 125 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 RFPL2O75678 378 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 KDM4BO94953 1096 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 CLDN14O95500 239 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 FTCDO95954 541 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 ABCB1P08183 1280 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 MYBL1P10243 752 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 ZNF24P17028 368 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 MUTP22033 750 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 OAS2P29728 719 aaKnown RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 BDKRB2P30411 391 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 PIK3CAP42336 1068 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 CLCNKAP51800 687 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 ZNF41P51814 821 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 ZNF131P52739 623 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 PPP5CP53041 499 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 HNRNPH2P55795 449 aaKnown RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 CSNK2A1P68400 391 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 RBP5P82980 135 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 GRSF1Q12849 480 aaKnown RBP eCLIP3.2□□□□□ -1.9
USP28-210ENST00000542033 DLG1Q12959 904 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 SNTA1Q13424 505 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 BAATQ14032 418 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 COG2Q14746 738 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 OASLQ15646 514 aaKnown RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 ADIPOQQ15848 244 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 PCGF3Q3KNV8 242 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 KBTBD12Q3ZCT8 623 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 CXorf66Q5JRM2 361 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 PAPPA-AS1Q5QFB9 102 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 TEX35Q5T0J7 233 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 CCDC122Q5T0U0 273 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 KIAA0930Q6ICG6 404 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 RGMBQ6NW40 437 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 IL27RAQ6UWB1 636 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 CHST3Q7LGC8 479 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 C16orf82Q7Z2V1 217 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 CACNA2D4Q7Z3S7 1137 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 RBM23Q86U06 439 aaKnown RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 CCDC65Q8IXS2 484 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 THNSL1Q8IYQ7 743 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 HACE1Q8IYU2 909 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 RNF168Q8IYW5 571 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 CHCHD4Q8N4Q1 142 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 MINDY1Q8N5J2 469 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 IL17RCQ8NAC3 791 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 CSNK2A3Q8NEV1 391 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 LILRB1Q8NHL6 650 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 ERMNQ8TAM6 284 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 WFIKKN2Q8TEU8 576 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 DUSP19Q8WTR2 217 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 TAF4BQ92750 862 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 TANKQ92844 425 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 MOAP1Q96BY2 351 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 RRNAD1Q96FB5 475 aaKnown RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 IGSF21Q96ID5 467 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 CDHR1Q96JP9 859 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 FAM81BQ96LP2 452 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 GSDMAQ96QA5 445 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 OR2A14Q96R47 310 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 TRIM6Q9C030 488 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 FAM107BQ9H098 131 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 OSGEPL1Q9H4B0 414 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 PDZD7Q9H5P4 517 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 RPAP3Q9H6T3 665 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 RANGRFQ9HD47 186 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 LTB4R2Q9NPC1 389 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 ZNF224Q9NZL3 707 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 C6orf203Q9P0P8 240 aaPredicted RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 ZMAT5Q9UDW3 170 aaKnown RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 CNOT8Q9UFF9 292 aaKnown RBP3.2□□□□□ -1.9
USP28-210ENST00000542033 SIX4Q9UIU6 781 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 RASAL2Q9UJF2 1139 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 TINAGQ9UJW2 476 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 PROCRQ9UNN8 238 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 VDAC3Q9Y277 283 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 ITM2BQ9Y287 266 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 TRPV2Q9Y5S1 764 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 TNIKQ9UKE5 1360 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 UHRF1BP1LA0JNW5 1464 aa3.2□□□□□ -1.9
USP28-210ENST00000542033 SAA2-SAA4A0A096LPE2 208 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 MAGEA13PA6NCF6 341 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 GOLGA6L9A6NEM1 432 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 LRRC72A6NJI9 287 aa3.19□□□□□ -1.9
USP28-210ENST00000542033 SRRM3A6NNA2 597 aaPredicted RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 PRR23D1E9PI22 279 aaPredicted RBP3.19□□□□□ -1.9
USP28-210ENST00000542033 PAPSS1O43252 624 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms