RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ZNF180Q9UJW8 692 aa9.21□□□□□ -0.94
DDX55-208ENST00000541259 SLC39A10Q9ULF5 831 aa9.21□□□□□ -0.94
DDX55-208ENST00000541259 PCDHGA2Q9Y5H1 932 aa9.21□□□□□ -0.94
DDX55-208ENST00000541259 IKBKGQ9Y6K9 419 aa9.21□□□□□ -0.94
DDX55-208ENST00000541259 DNAH14Q0VDD8 3507 aa9.21□□□□□ -0.94
DDX55-208ENST00000541259 MYO15AQ9UKN7 3530 aa9.21□□□□□ -0.94
DDX55-208ENST00000541259 A0A1W2PPM1 405 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 TRIM49D1C9J1S8 452 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 BCAT2O15382 392 aaPredicted RBP9.2□□□□□ -0.94
DDX55-208ENST00000541259 VEGFDO43915 354 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 NUAK1O60285 661 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 DNAJC6O75061 913 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 CDH16O75309 829 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 RHOBTB1O94844 696 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 TRIM16O95361 564 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 ESR1P03372 595 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 RALBP11234 206 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 RABIFP47224 123 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 SERPINB9P50453 376 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 ADARP55265 1226 aaKnown RBP9.2□□□□□ -0.94
DDX55-208ENST00000541259 TAS2R39P59534 338 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 EIF2B5Q13144 721 aaKnown RBP9.2□□□□□ -0.94
DDX55-208ENST00000541259 ZNF460Q14592 562 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 PLA2G4EQ3MJ16 856 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 ZNF542PQ5EBM4 170 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 PTRHD1Q6GMV3 140 aaKnown RBP9.2□□□□□ -0.94
DDX55-208ENST00000541259 CRTC3Q6UUV7 619 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 MACC1Q6ZN28 852 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 RD3Q7Z3Z2 195 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 CMC1Q7Z7K0 106 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 PIM3Q86V86 326 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 SPATS2Q86XZ4 545 aaKnown RBP9.2□□□□□ -0.94
DDX55-208ENST00000541259 MFSD2AQ8NA29 543 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 PRSS33Q8NF86 280 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 OR1E3Q8WZA6 343 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 PIGKQ92643 395 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 PDXPQ96GD0 296 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 WDR92Q96MX6 357 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 TCEAL2Q9H3H9 227 aaPredicted RBP9.2□□□□□ -0.94
DDX55-208ENST00000541259 CENPHQ9H3R5 247 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 VIPAS39Q9H9C1 493 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 FGF22Q9HCT0 170 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 TM7SF3Q9NS93 570 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 SLC23A2Q9UGH3 650 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 LGALS13Q9UHV8 139 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 KLF15Q9UIH9 416 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 MOSPD1Q9UJG1 213 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 PILRBQ9UKJ0 227 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 SUFUQ9UMX1 484 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 SLC17A4Q9Y2C5 497 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 VWA7Q9Y334 891 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 PLEKHM1Q9Y4G2 1056 aa9.2□□□□□ -0.94
DDX55-208ENST00000541259 ARID1BQ8NFD5 2236 aaPredicted RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 SPTY2D1-AS1A0A0U1RR47 76 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 A0A1B0GVT2 93 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 PRSS38A1L453 326 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 TLR4O00206 839 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 TOR1BO14657 336 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 TPP1O14773 563 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 CHUKO15111 745 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 PHGDHO43175 533 aaKnown RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 GRID2O43424 1007 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 KRT38O76015 456 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 AP2A2O94973 939 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 ALDOAP04075 364 aaKnown RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 SNRPAP09012 282 aaKnown RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 OR56A5P0C7T3 313 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 CHRM3P20309 590 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 FDXRP22570 491 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 PBLDP30039 288 aaPredicted RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 CCR7P32248 378 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 GNPDA1P46926 289 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 CLCN7P51798 805 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 THOP1P52888 689 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 SRP54P61011 504 aaKnown RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 BNC1Q01954 994 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 TCF15Q12870 199 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 GTF2H3Q13889 308 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 FZD2Q14332 565 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 USP10Q14694 798 aaKnown RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 RASA2Q15283 850 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 TCEA2Q15560 299 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 ALG11Q2TAA5 492 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 PYCR3Q53H96 274 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 PPM1JQ5JR12 505 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 PRAMEF14Q5SWL7 426 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 FAM45BPQ6NSW5 357 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 TMEM207Q6UWW9 146 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 XKR5Q6UX68 686 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 C11orf96Q7Z7L8 435 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 TRAPPC5Q8IUR0 188 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 LILRA3Q8N6C8 439 aaPredicted RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 SIDT2Q8NBJ9 832 aaKnown RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 OR56A4Q8NGH8 313 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 GIMAP7Q8NHV1 300 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 FAM45AQ8TCE6 357 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 HEXDCQ8WVB3 486 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 ARL8AQ96BM9 186 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 SCARF2Q96GP6 870 aaPredicted RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 RUFY1Q96T51 708 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms