RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 DNAJB7Q7Z6W7 309 aaPredicted RBP12.37□□□□□ -0.43
RNF4-222ENST00000541204 FBXO39Q8N4B4 442 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 PAF1Q8N7H5 531 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 ARL14EPQ8N8R7 260 aaPredicted RBP12.37□□□□□ -0.43
RNF4-222ENST00000541204 GOLM1Q8NBJ4 401 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 PDZD8Q8NEN9 1154 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 COG8Q96MW5 612 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 TRIM54Q9BYV2 358 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 TM6SF2Q9BZW4 377 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 NAA50Q9GZZ1 169 aaKnown RBP12.37□□□□□ -0.43
RNF4-222ENST00000541204 RPF2Q9H7B2 306 aaKnown RBP12.37□□□□□ -0.43
RNF4-222ENST00000541204 POLR1BQ9H9Y6 1135 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 COMMD8Q9NX08 183 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 CHCHD3Q9NX63 227 aaKnown RBP12.37□□□□□ -0.43
RNF4-222ENST00000541204 GALPQ9UBC7 116 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 ANKRD12Q6UB98 2062 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 K7ERQ8 282 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 OR1I1O60431 355 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 RHOBTB1O94844 696 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 PRLP01236 227 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 HNRNPCP07910 306 aaKnown RBP eCLIP12.37□□□□□ -0.434e-7■□□□□ 10.8
RNF4-222ENST00000541204 CAPGP40121 348 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 RPS9P46781 194 aaKnown RBP12.37□□□□□ -0.43
RNF4-222ENST00000541204 ZFP36L2P47974 494 aaKnown RBP12.37□□□□□ -0.43
RNF4-222ENST00000541204 SUOXP51687 545 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 STC1P52823 247 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 ARF5P84085 180 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 FOXM1Q08050 763 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 PAQR3Q6TCH7 311 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 TMEM26Q6ZUK4 368 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 KCTD8Q6ZWB6 473 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 CROCCP3Q8IVE0 287 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 KIAA2013Q8IYS2 634 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 VPS50Q96JG6 964 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 C1orf50Q9BV19 199 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 TFB2MQ9H5Q4 396 aaKnown RBP12.37□□□□□ -0.43
RNF4-222ENST00000541204 FKBPLQ9UIM3 349 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 ANAPC2Q9UJX6 822 aa12.37□□□□□ -0.43
RNF4-222ENST00000541204 A0A1B0GVM2 712 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 A0A1W2PPW3 197 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 SH3PXD2BA1X283 911 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 ZNF701M0R085 212 aaPredicted RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 DEFB103AP81534 67 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 ZXDBP98169 803 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 TNK2Q07912 1038 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 RCAN2Q14206 197 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 TSNQ15631 228 aaKnown RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 NEDD8Q15843 81 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 PYCR3Q53H96 274 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 CXorf57Q6NSI4 855 aaKnown RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 TBPL2Q6SJ96 375 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 PATL1Q86TB9 770 aaKnown RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 PIANPQ8IYJ0 282 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 THAP11Q96EK4 314 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 ZNF599Q96NL3 588 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 SLC30A3Q99726 388 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 AARSD1Q9BTE6 412 aaKnown RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 TDRD1Q9BXT4 1180 aaKnown RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 SEZ6LQ9BYH1 1024 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 SARS2Q9NP81 518 aaKnown RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 CD320Q9NPF0 282 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 INTS7Q9NVH2 962 aaKnown RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 CCDC154A6NI56 674 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 KERAO60938 352 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 NDUFS3O75489 264 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 EPOP01588 193 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 TFPTP0C1Z6 253 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 FCGR1AP12314 374 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 CTPS1P17812 591 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 CD247P20963 164 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 AGTR2P50052 363 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 ACVR1Q04771 509 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 VEPH1Q14D04 833 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 ZRANB3Q5FWF4 1079 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 COQ5Q5HYK3 327 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 FGD3Q5JSP0 725 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 PTRH1Q86Y79 214 aaKnown RBP12.36□□□□□ -0.43
RNF4-222ENST00000541204 STAG3L4Q8TBR4 150 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 WFDC5Q8TCV5 224 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 ITFG2Q969R8 447 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 ESAMQ96AP7 390 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 PLD4Q96BZ4 506 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 ACOX2Q99424 681 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 CFHR5Q9BXR6 569 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 BACE2Q9Y5Z0 518 aa12.36□□□□□ -0.43
RNF4-222ENST00000541204 ILVBLA1L0T0 632 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 A8MX80 341 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 CDC7O00311 574 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 ECI2O75521 394 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 CCL5P13501 91 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 GJA1P17302 382 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 GKP32189 559 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 ZNF140P52738 457 aaPredicted RBP12.35□□□□□ -0.43
RNF4-222ENST00000541204 MAPK10P53779 464 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 TRAF2Q12933 501 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 PTPRNQ16849 979 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 C5orf22Q49AR2 442 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 TIGD2Q4W5G0 525 aa12.35□□□□□ -0.43
RNF4-222ENST00000541204 SETMARQ53H47 684 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms